Pakket: tabix (1.20+ds-1 en anderen)

Verwijzigingen voor tabix

Debian bronnen:

Het bronpakket htslib downloaden:

Beheerders:

Debian Med Packaging Team (QA-pagina, Mailarchief)
Charles Plessy (QA-pagina)
Andreas Tille (QA-pagina)
Michael R. Crusoe (QA-pagina)
Steffen Moeller (QA-pagina)
Étienne Mollier (QA-pagina)

Externe bronnen:

Homepage [github.com]

Vergelijkbare pakketten:

generic indexer for TAB-delimited genome position files

Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools.

Tags: Implemented in: C, Role: Program, Wetenschap: science::calculation, use::calculating, Supports Format: HTML, Hypertext Markup Language, Works with: Text

Andere aan tabix gerelateerde pakketten

depends

recommends

suggests

enhances

dep: libbz2-1.0

high-quality block-sorting file compressor library - runtime
dep: libc6 (>= 2.34) [niet alpha, ia64, sh4]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb

dep: libc6 (>= 2.37) [sh4]
dep: libc6.1 (>= 2.34) [alpha]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: libdeflate0 (>= 1.0)

fast, whole-buffer DEFLATE-based compression and decompression
dep: libhtscodecs2 (>= 1.3.0)

Custom compression for CRAM and others
dep: liblzma5 (>= 5.1.1alpha+20120614)

XZ-format compression library
dep: zlib1g (>= 1:1.1.4)

compressiebibliotheek - programma's

tabix downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	1.20+ds-1	478,0 kB	2.700,0 kB	[overzicht]
amd64	1.20+ds-1	471,4 kB	2.249,0 kB	[overzicht]
arm64	1.20+ds-1	438,8 kB	2.249,0 kB	[overzicht]
armel	1.20+ds-1	401,4 kB	2.062,0 kB	[overzicht]
armhf	1.20+ds-1	404,8 kB	1.494,0 kB	[overzicht]
hppa (unofficial port)	1.20+ds-1	461,7 kB	2.282,0 kB	[overzicht]
i386	1.20+ds-1	517,3 kB	2.566,0 kB	[overzicht]
ia64 (unofficial port)	1.19+ds-1.1+b1	558,6 kB	4.599,0 kB	[overzicht]
m68k (unofficial port)	1.20+ds-1	435,0 kB	2.078,0 kB	[overzicht]
mips64el	1.20+ds-1	430,6 kB	2.618,0 kB	[overzicht]
ppc64 (unofficial port)	1.20+ds-1	494,7 kB	3.145,0 kB	[overzicht]
ppc64el	1.20+ds-1	508,1 kB	3.017,0 kB	[overzicht]
riscv64	1.20+ds-1	488,8 kB	1.893,0 kB	[overzicht]
s390x	1.20+ds-1	462,5 kB	2.465,0 kB	[overzicht]
sh4 (unofficial port)	1.20+ds-1	493,9 kB	1.993,0 kB	[overzicht]
sparc64 (unofficial port)	1.20+ds-1	402,4 kB	3.160,0 kB	[overzicht]
x32 (unofficial port)	1.20+ds-1	473,0 kB	2.198,0 kB	[overzicht]