[ 原始碼: ggd-utils ]
套件:ggd-utils(1.0.0+ds-1 以及其他的)
programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:
* a .tbi is present * the VCF has ""##fileformat=VCF" as the first line * the VCF has a #CHROM header * the chromosome are in the order specified by the genome file (and present) * the positions are sorted * the positions are <= the chromosome lengths defined in the genome file.
As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes
其他與 ggd-utils 有關的套件
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- dep: libc6 (>= 2.34) [除 alpha, loong64]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
- dep: libc6 (>= 2.40) [loong64]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6.1-udeb
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- dep: libgcc-s1 (>= 3.3.1) [ppc64, x32]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.4) [alpha, sparc64]
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- dep: libgo22 [alpha, ppc64, sparc64, x32]
- Runtime library for GNU Go applications
下載 ggd-utils
硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
---|---|---|---|---|
alpha (非官方移植版) | 1.0.0+ds-1+b9 | 190。5 kB | 759。0 kB | [檔案列表] |
amd64 | 1.0.0+ds-1+b16 | 2,206。1 kB | 6,605。0 kB | [檔案列表] |
arm64 | 1.0.0+ds-1+b16 | 1,895。3 kB | 6,162。0 kB | [檔案列表] |
armel | 1.0.0+ds-1+b16 | 1,964。1 kB | 6,504。0 kB | [檔案列表] |
armhf | 1.0.0+ds-1+b16 | 1,958。5 kB | 6,504。0 kB | [檔案列表] |
i386 | 1.0.0+ds-1+b16 | 2,127。9 kB | 6,428。0 kB | [檔案列表] |
loong64 (非官方移植版) | 1.0.0+ds-1+b5 | 1,790。6 kB | 6,011。0 kB | [檔案列表] |
mips64el | 1.0.0+ds-1+b16 | 1,791。9 kB | 7,204。0 kB | [檔案列表] |
ppc64 (非官方移植版) | 1.0.0+ds-1+b9 | 219。6 kB | 1,088。0 kB | [檔案列表] |
ppc64el | 1.0.0+ds-1+b16 | 1,888。7 kB | 6,417。0 kB | [檔案列表] |
riscv64 | 1.0.0+ds-1+b11 | 1,962。8 kB | 6,225。0 kB | [檔案列表] |
s390x | 1.0.0+ds-1+b16 | 2,005。8 kB | 6,865。0 kB | [檔案列表] |
sparc64 (非官方移植版) | 1.0.0+ds-1+b8 | 187。8 kB | 1,274。0 kB | [檔案列表] |
x32 (非官方移植版) | 1.0.0+ds-1+b9 | 199。3 kB | 716。0 kB | [檔案列表] |