[ 原始碼: ggd-utils ]
套件:ggd-utils(0.0.7+ds-3 以及其他的)
programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:
* a .tbi is present * the VCF has ""##fileformat=VCF" as the first line * the VCF has a #CHROM header * the chromosome are in the order specified by the genome file (and present) * the positions are sorted * the positions are <= the chromosome lengths defined in the genome file.
As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes
其他與 ggd-utils 有關的套件
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- dep: libc6 (>= 2.17) [arm64, ppc64el]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
- dep: libc6 (>= 2.3.6-6~) [i386]
- dep: libc6 (>= 2.4) [除 arm64, i386, ppc64el]
下載 ggd-utils
硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
---|---|---|---|---|
amd64 | 0.0.7+ds-3+b6 | 1,685。4 kB | 5,273。0 kB | [檔案列表] |
arm64 | 0.0.7+ds-3+b6 | 1,441。3 kB | 4,860。0 kB | [檔案列表] |
armel | 0.0.7+ds-3+b6 | 1,470。3 kB | 4,508。0 kB | [檔案列表] |
armhf | 0.0.7+ds-3+b6 | 1,465。2 kB | 4,444。0 kB | [檔案列表] |
i386 | 0.0.7+ds-3+b6 | 1,601。7 kB | 4,482。0 kB | [檔案列表] |
mips64el | 0.0.7+ds-3+b6 | 1,362。7 kB | 5,335。0 kB | [檔案列表] |
mipsel | 0.0.7+ds-3+b6 | 1,385。8 kB | 4,987。0 kB | [檔案列表] |
ppc64el | 0.0.7+ds-3+b6 | 1,415。6 kB | 4,924。0 kB | [檔案列表] |
s390x | 0.0.7+ds-3+b6 | 1,545。2 kB | 5,183。0 kB | [檔案列表] |