Package: ampliconnoise (1.29-15 and others)

Links for ampliconnoise

Debian Resources:

Download Source Package ampliconnoise:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Andreas Tille (QA Page)
Pranav Ballaney (QA Page)
Étienne Mollier (QA Page)

External Resources:

Homepage [github.com]

Similar packages:

remoção de ruído de amplicons PCR sequenciados em 454

AmpliconNoise é um pacote de aplicações para arrumar sequências de dados de alto rendimento. Consiste em três principais partes:

Pyronoise - realiza clustering baseado em fluxograma para encontrar leituras incorretas SeqNoise - remove mutações de pontos PCR Perseus - remove quimeras PCR sem a necessidade de um conjunto de sequências de referência

Anteriormente, havia um "Pyronoise" independente dos(as) mesmos(as) autores(as) e este pacote inclui uma versão atualizada. Também existe um "Denoiser" no Qiime, que é relacionado, mas distinto.

Tags: Role: Program

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dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

GNU Biblioteca C: Bibliotecas compartilhadas
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.40) [sh4]
dep: libc6.1 (>= 2.34) [alpha]

GNU Biblioteca C: Bibliotecas compartilhadas
also a virtual package provided by libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: libgsl27 (>= 2.7.1) [ia64]

GNU Scientific Library (GSL) -- library package
dep: libgsl28 (>= 2.8+dfsg) [not ia64]

GNU Scientific Library (GSL) -- library package
dep: libmpich12 [armel, armhf, hppa, i386, m68k, sh4]

Shared libraries for MPICH

dep: libmpich12 (>= 4.2.0) [x32]
dep: libopenmpi3t64 (>= 4.1.6) [ia64]

high performance message passing library -- shared library
dep: libopenmpi40 (>= 5.0.6) [not armel, armhf, hppa, i386, ia64, m68k, sh4, x32]

high performance message passing library -- shared library
dep: mafft

Multiple alignment program for amino acid or nucleotide sequences

rec: mpi-default-bin [not ia64]

Standard MPI runtime programs (metapackage)
rec: openmpi-bin [ia64]

biblioteca de passagem de mensagens de alto desempenho -- binários

Download ampliconnoise

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.29-15+b1	1,076.1 kB	2,528.0 kB	[list of files]
amd64	1.29-15+b1	1,084.5 kB	2,052.0 kB	[list of files]
arm64	1.29-15+b1	1,073.3 kB	2,400.0 kB	[list of files]
armel	1.29-15	1,064.2 kB	1,966.0 kB	[list of files]
armhf	1.29-15	1,059.0 kB	1,834.0 kB	[list of files]
hppa (unofficial port)	1.29-15	1,066.4 kB	1,930.0 kB	[list of files]
i386	1.29-15	1,081.3 kB	2,046.0 kB	[list of files]
ia64 (unofficial port)	1.29-11	1,096.8 kB	2,314.0 kB	[list of files]
m68k (unofficial port)	1.29-15	1,052.2 kB	1,914.0 kB	[list of files]
mips64el	1.29-15+b1	1,072.8 kB	2,422.0 kB	[list of files]
ppc64 (unofficial port)	1.29-15+b1	1,086.7 kB	2,592.0 kB	[list of files]
ppc64el	1.29-15+b1	1,092.7 kB	2,592.0 kB	[list of files]
riscv64	1.29-15+b1	1,079.0 kB	1,912.0 kB	[list of files]
s390x	1.29-15+b1	1,097.6 kB	2,108.0 kB	[list of files]
sh4 (unofficial port)	1.29-15	1,082.6 kB	2,386.0 kB	[list of files]
sparc64 (unofficial port)	1.29-15+b1	1,065.3 kB	14,891.0 kB	[list of files]
x32 (unofficial port)	1.29-15	1,079.1 kB	2,006.0 kB	[list of files]