Package: tiddit (3.6.1+dfsg-2 and others)

[ Source: tiddit  ]

Strukturel variant-kald

TIDDIT er et værktøj brugt til at identificere kromosomale omlægninger ved hjælp af Mate Pair- eller Paired End-sekventeringsdata. TIDDIT identificerer intra- og inter-kromosomale translokationer, sletninger, tandem-duplikationer og inversioner ved hjælp af supplerende justeringer samt uoverensstemmende par.

TIDDIT har to analysemoduler. Sv-tilstanden, som bruges til at søge efter strukturelle varianter. Og cov-tilstand, der analyserer læsedybden af en bam-fil og opretter en dækningsrapport.

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Download tiddit

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	3.6.1+dfsg-2+b2	272.0 kB	1,557.0 kB	[list of files]
amd64	3.6.1+dfsg-2+b1	322.3 kB	1,376.0 kB	[list of files]
arm64	3.6.1+dfsg-2+b1	255.1 kB	1,292.0 kB	[list of files]
armel	3.6.1+dfsg-2+b1	267.6 kB	1,412.0 kB	[list of files]
armhf	3.6.1+dfsg-2+b1	273.3 kB	1,156.0 kB	[list of files]
hppa (unofficial port)	2.12.2+dfsg-1+b1	228.8 kB	906.0 kB	[list of files]
i386	3.6.1+dfsg-2+b1	299.6 kB	1,368.0 kB	[list of files]
ia64 (unofficial port)	3.6.1+dfsg-1+b1	478.9 kB	3,466.0 kB	[list of files]
loong64 (unofficial port)	3.6.1+dfsg-2+b2	275.6 kB	1,484.0 kB	[list of files]
m68k (unofficial port)	3.6.1+dfsg-2+b1	241.6 kB	1,130.0 kB	[list of files]
mips64el	3.6.1+dfsg-2+b1	236.9 kB	1,511.0 kB	[list of files]
ppc64 (unofficial port)	2.12.2+dfsg-1+b1	225.3 kB	1,232.0 kB	[list of files]
ppc64el	3.6.1+dfsg-2+b1	277.3 kB	1,548.0 kB	[list of files]
riscv64	3.6.1+dfsg-2+b1	295.9 kB	964.0 kB	[list of files]
sh4 (unofficial port)	3.6.1+dfsg-2+b1	389.4 kB	1,284.0 kB	[list of files]
x32 (unofficial port)	3.6.1+dfsg-2+b1	335.3 kB	1,316.0 kB	[list of files]