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[ 源代码: seqan-raptor  ]

软件包:seqan-raptor(3.0.1+ds-5 以及其他的)

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pre-filter for querying very large collections of nucleotide sequences

Raptor is a system for approximately searching many queries such as next-generation sequencing reads or transcripts in large collections of nucleotide sequences. Raptor uses winnowing minimizers to define a set of representative k-mers, an extension of the interleaved Bloom filters (IBFs) as a set membership data structure and probabilistic thresholding for minimizers. This approach allows compression and partitioning of the IBF to enable the effective use of secondary memory.

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下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
alpha (非官方移植版) 3.0.1+ds-5 579.4 kB2,362.0 kB [文件列表]
amd64 3.0.1+ds-5 646.1 kB2,087.0 kB [文件列表]
arm64 3.0.1+ds-5+b1 575.5 kB1,976.0 kB [文件列表]
ia64 (非官方移植版) 2.0.0.0.git.fecfbca+ds-3 695.6 kB4,733.0 kB [文件列表]
mips64el 3.0.1+ds-5 529.1 kB2,319.0 kB [文件列表]
ppc64 (非官方移植版) 3.0.0+ds-2 458.7 kB1,831.0 kB [文件列表]
ppc64el 3.0.1+ds-5 633.6 kB2,359.0 kB [文件列表]
riscv64 3.0.1+ds-5+b1 620.9 kB1,560.0 kB [文件列表]
sparc64 (非官方移植版) 3.0.1+ds-2 473.3 kB2,111.0 kB [文件列表]