Paket: murasaki (1.68.6-14 ve diğerleri)

[ Kaynak: murasaki  ]

homology detection tool across multiple large genomes

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

murasaki ile İlgili Diğer Paketler

• dep: libboost-filesystem1.74.0 (>= 1.74.0) [sparc64]

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-filesystem1.83.0 (>= 1.83.0) [sparc64 değil]

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-iostreams1.74.0 (>= 1.74.0) [sparc64]

  Boost.Iostreams Library

• dep: libboost-iostreams1.83.0 (>= 1.83.0) [sparc64 değil]

  Boost.Iostreams Library

• dep: libboost-regex1.74.0-icu67 [sparc64]

  Paket mevcut değil

• dep: libboost-system1.74.0 (>= 1.74.0) [sparc64]

  Operating system (e.g. diagnostics support) library

• dep: libc6 (>= 2.29) [sparc64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.34) [hppa, m68k, ppc64]

  dep: libc6 (>= 2.37) [sh4]

  dep: libc6 (>= 2.38) [alpha, hppa, ia64, m68k, ppc64, sh4, sparc64 değil]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libcrypto++6 [sparc64]

  Paket mevcut değil

• dep: libgcc-s1 (>= 3.0) [amd64, arm64, i386, mips64el, ppc64, ppc64el, s390x, x32]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

  dep: libgcc-s1 (>= 4.3) [sparc64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libstdc++6 (>= 13.1) [alpha, hppa, ia64, m68k, ppc64, sh4]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 14) [alpha, hppa, ia64, m68k, ppc64, sh4, sparc64 değil]

  dep: libstdc++6 (>= 5.2) [sparc64]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: murasaki-common

  homology detection tool across multiple large genomes (common files)

• rec: murasaki-examples

  Paket mevcut değil

murasaki indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	1.68.6-13+b5	586,0 kB	4.914,0 kB	[dosya listesi]
amd64	1.68.6-14	628,7 kB	4.399,0 kB	[dosya listesi]
arm64	1.68.6-14	541,2 kB	4.318,0 kB	[dosya listesi]
armel	1.68.6-14	452,9 kB	3.326,0 kB	[dosya listesi]
armhf	1.68.6-14	462,8 kB	2.350,0 kB	[dosya listesi]
hppa (resmi olmayan port)	1.68.6-13+b5	585,9 kB	4.020,0 kB	[dosya listesi]
i386	1.68.6-14	638,5 kB	4.166,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	1.68.6-13+b5	658,9 kB	8.435,0 kB	[dosya listesi]
m68k (resmi olmayan port)	1.68.6-13+b5	487,8 kB	3.599,0 kB	[dosya listesi]
mips64el	1.68.6-14	583,8 kB	5.865,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	1.68.6-13+b5	597,0 kB	5.792,0 kB	[dosya listesi]
ppc64el	1.68.6-14	605,0 kB	5.599,0 kB	[dosya listesi]
riscv64	1.68.6-14	584,6 kB	3.202,0 kB	[dosya listesi]
s390x	1.68.6-14	609,4 kB	4.826,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	1.68.6-13+b4	505,8 kB	3.596,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	1.68.6-11	413,1 kB	3.088,0 kB	[dosya listesi]
x32 (resmi olmayan port)	1.68.6-13+b6	603,0 kB	3.979,0 kB	[dosya listesi]