Pakket: kissplice (2.6.7-1 en anderen)

Verwijzigingen voor kissplice

Debian bronnen:

Het bronpakket kissplice downloaden:

Beheerders:

Externe bronnen:

Homepage [kissplice.prabi.fr]

Vergelijkbare pakketten:

Detection of various kinds of polymorphisms in RNA-seq data

KisSplice is a piece of software that enables the analysis of RNA-seq data with or without a reference genome. It is an exact local transcriptome assembler that allows one to identify SNPs, indels and alternative splicing events. It can deal with an arbitrary number of biological conditions, and will quantify each variant in each condition. It has been tested on Illumina datasets of up to 1G reads. Its memory consumption is around 5Gb for 100M reads.

Andere aan kissplice gerelateerde pakketten

depends

recommends

suggests

enhances

dep: bcalm [niet alpha, hppa, m68k, sh4, x32]

de Bruijn compaction in low memory
dep: libc6 (>= 2.11) [hppa]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb

dep: libc6 (>= 2.17) [sh4]

dep: libc6 (>= 2.29) [x32]

dep: libc6 (>= 2.38) [amd64, arm64, mips64el, ppc64, ppc64el, riscv64, sparc64]

dep: libc6 (>= 2.39) [loong64]

dep: libc6 (>= 2.4) [m68k]
dep: libc6.1 (>= 2.37) [ia64]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6.1-udeb

dep: libc6.1 (>= 2.4) [alpha]
dep: libgcc-s1 (>= 3.0) [amd64, arm64, loong64, mips64el, ppc64, ppc64el, x32]

GCC support bibliotheek

dep: libgcc-s1 (>= 3.4) [sparc64]

dep: libgcc-s1 (>= 4.2) [ia64]

dep: libgcc-s1 (>= 4.3) [riscv64]
dep: libgcc1 (>= 1:4.1.1) [alpha]

Pakket niet beschikbaar

dep: libgcc1 (>= 1:4.2.1) [sh4]
dep: libgcc2 (>= 4.2.1) [m68k]

Pakket niet beschikbaar
dep: libgcc4 (>= 4.1.1) [hppa]

Pakket niet beschikbaar
dep: libgomp1 (>= 4.9) [niet alpha, hppa, m68k, sh4, x32]

GCC OpenMP (GOMP) support library
dep: libstdc++6 (>= 13.1) [niet alpha, hppa, m68k, sh4, x32]

GNU Standard C++ Library v3

dep: libstdc++6 (>= 4.6) [hppa, sh4]

dep: libstdc++6 (>= 4.9) [alpha, m68k]

dep: libstdc++6 (>= 9) [x32]
dep: libunwind8 [ia64]

library to determine the call-chain of a program - runtime
dep: python [alpha, hppa, m68k, sh4]

Pakket niet beschikbaar
dep: python3 [niet alpha, hppa, m68k, sh4]

interactive high-level object-oriented language (default python3 version)
dep: zlib1g (>= 1:1.1.4) [niet alpha, hppa, m68k, sh4]

compressiebibliotheek - programma's

dep: zlib1g (>= 1:1.2.3.4) [alpha, hppa, m68k, sh4]

kissplice downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	2.2.1-1	596,7 kB	1.376,0 kB	[overzicht]
amd64	2.6.7-1	485,0 kB	1.178,0 kB	[overzicht]
arm64	2.6.7-1	469,8 kB	1.370,0 kB	[overzicht]
hppa (unofficial port)	2.1.0-1	1.289,9 kB	2.181,0 kB	[overzicht]
ia64 (unofficial port)	2.6.2-3	506,4 kB	1.581,0 kB	[overzicht]
loong64 (unofficial port)	2.6.7-1	469,7 kB	1.146,0 kB	[overzicht]
m68k (unofficial port)	2.2.1-1	555,8 kB	1.120,0 kB	[overzicht]
mips64el	2.6.7-1	486,1 kB	1.466,0 kB	[overzicht]
ppc64 (unofficial port)	2.6.7-1	485,5 kB	1.434,0 kB	[overzicht]
ppc64el	2.6.7-1	486,5 kB	1.434,0 kB	[overzicht]
riscv64	2.6.7-1	480,3 kB	1.002,0 kB	[overzicht]
sh4 (unofficial port)	2.1.0-1	1.282,1 kB	2.090,0 kB	[overzicht]
sparc64 (unofficial port)	2.6.7-1	460,2 kB	7.783,0 kB	[overzicht]
x32 (unofficial port)	2.5.3-1	4.035,5 kB	15.302,0 kB	[overzicht]