Package: macs (3.0.2-1 and others)

[ Source: macs  ]

Modelbaseret analyse af ChIP-Seq på korte læsesekvenser

MACS opbygger empirisk længden af de sekventerede ChIP-fragmenter, som tenderer til at være kortere end lydbehandling eller størrelsesestimater for bibliotekskonstruktion og bruger den til at forbedre den rumlige opløsning af forudsagte bindingssteder. MACS bruger også en dynamisk Poisson-fordeling til effektivt at fange lokale skævheder i arvemassesekvensen, hvilket giver mulighed for mere følsom og robust forudsigelse. MACS sammenligner positivt til eksisterende ChIP-Seq peak-finding-algoritmer, er offentligt tilgængelig åben kildekode og kan bruges til ChIP-Seq med eller uden kontrolprøver.

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Download macs

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	3.0.2-1+b3	2,823.8 kB	9,248.0 kB	[list of files]
amd64	3.0.2-1+b3	3,047.7 kB	8,250.0 kB	[list of files]
arm64	3.0.2-1+b3	2,788.5 kB	8,056.0 kB	[list of files]
armel	3.0.2-1+b3	2,800.3 kB	8,452.0 kB	[list of files]
armhf	3.0.2-1+b3	2,858.6 kB	6,788.0 kB	[list of files]
hppa (unofficial port)	3.0.2-1+b3	2,858.6 kB	8,823.0 kB	[list of files]
i386	3.0.2-1+b3	3,008.0 kB	8,708.0 kB	[list of files]
ia64 (unofficial port)	2.2.6-3+b1	2,653.4 kB	11,172.0 kB	[list of files]
m68k (unofficial port)	3.0.2-1	3,389.2 kB	12,726.0 kB	[list of files]
ppc64 (unofficial port)	3.0.2-1+b3	2,888.4 kB	10,233.0 kB	[list of files]
ppc64el	3.0.2-1+b3	2,929.5 kB	9,720.0 kB	[list of files]
riscv64	3.0.2-1+b3	3,062.1 kB	6,644.0 kB	[list of files]
s390x	3.0.2-1+b3	2,873.7 kB	8,082.0 kB	[list of files]
sh4 (unofficial port)	3.0.2-1+b1	4,294.4 kB	13,553.0 kB	[list of files]
sparc64 (unofficial port)	2.2.9.1-1+b1	2,977.6 kB	28,654.0 kB	[list of files]
x32 (unofficial port)	2.2.9.1-1	2,527.6 kB	5,365.0 kB	[list of files]