套件:bali-phy(3.6.1+dfsg-2 以及其他的)
Bayesian Inference of Alignment and Phylogeny
BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.
BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.
其他與 bali-phy 有關的套件
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- dep: libboost-chrono1.83.0t64 (>= 1.83.0)
- C++ representation of time duration, time point, and clocks
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- dep: libboost-filesystem1.83.0 (>= 1.83.0)
- filesystem operations (portable paths, iteration over directories, etc) in C++
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- dep: libboost-program-options1.83.0 (>= 1.83.0)
- program options library for C++
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- dep: libboost-random1.83.0 (>= 1.83.0)
- Boost Random Number Library
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- dep: libc6 (>= 2.34)
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
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- dep: libcairo2 (>= 1.4.10)
- Cairo 2D vector graphics library
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- dep: libgcc-s1 (>= 3.0) [ppc64el, s390x]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.4) [amd64]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [i386]
- dep: libgcc-s1 (>= 4.5) [arm64, mips64el]
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- rec: gnuplot
- Command-line driven interactive plotting program.
同時作為一個虛擬套件由這些套件填實: gnuplot-nox, gnuplot-qt, gnuplot-x11
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- rec: r-base
- GNU R statistical computation and graphics system
下載 bali-phy
硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
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amd64 | 3.6.1+dfsg-2+b1 | 6,382。7 kB | 37,532。0 kB | [檔案列表] |
arm64 | 3.6.1+dfsg-2+b1 | 5,733。5 kB | 35,384。0 kB | [檔案列表] |
armel | 3.6.1+dfsg-2+b1 | 4,895。0 kB | 31,410。0 kB | [檔案列表] |
armhf | 3.6.1+dfsg-2+b1 | 4,485。1 kB | 23,018。0 kB | [檔案列表] |
i386 | 3.6.1+dfsg-2+b1 | 6,163。5 kB | 36,222。0 kB | [檔案列表] |
mips64el | 3.6.1+dfsg-2+b1 | 5,714。9 kB | 43,529。0 kB | [檔案列表] |
ppc64el | 3.6.1+dfsg-2+b1 | 6,244。1 kB | 41,282。0 kB | [檔案列表] |
s390x | 3.6.1+dfsg-2+b1 | 5,010。0 kB | 35,052。0 kB | [檔案列表] |