Package: bali-phy (4.0-1)

[ Source: bali-phy  ]

Bayesian Inference of Alignment and Phylogeny

BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.

BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.

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Architecture	Package Size	Installed Size	Files
amd64	9,822.0 kB	52,710.0 kB	[list of files]
arm64	8,730.3 kB	47,950.0 kB	[list of files]
i386	9,253.0 kB	51,011.0 kB	[list of files]
mips64el	8,919.8 kB	58,594.0 kB	[list of files]
ppc64el	9,592.2 kB	56,065.0 kB	[list of files]
riscv64	10,112.1 kB	41,347.0 kB	[list of files]
s390x	7,548.7 kB	48,143.0 kB	[list of files]