Package: bali-phy (3.6.1+dfsg-3)

[ Source: bali-phy  ]

Bayesian Inference of Alignment and Phylogeny

BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.

BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.

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Architecture	Package Size	Installed Size	Files
amd64	6,676.8 kB	39,067.0 kB	[list of files]
arm64	6,024.2 kB	36,555.0 kB	[list of files]
armel	5,076.0 kB	32,497.0 kB	[list of files]
armhf	4,629.1 kB	23,653.0 kB	[list of files]
i386	6,350.6 kB	37,805.0 kB	[list of files]
mips64el	5,923.0 kB	44,997.0 kB	[list of files]
ppc64el	6,422.8 kB	42,177.0 kB	[list of files]
riscv64	6,670.8 kB	31,791.0 kB	[list of files]
s390x	5,229.2 kB	36,851.0 kB	[list of files]