Paket: python3-cyvcf2 (0.31.1-2 ve diğerleri)

[ Kaynak: cyvcf2  ]

VCF parser based on htslib (Python 3)

This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.

cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.

This package installs the library for Python 3.

python3-cyvcf2 ile İlgili Diğer Paketler

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.7) [amd64, arm64, ppc64el, riscv64 değil]

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.14)

  dep: python3 (>= 3.12~)

• dep: python3-click

  Command-Line Interface Creation Kit - Python 3.x

• dep: python3-coloredlogs

  colored terminal output for Python 3's logging module

• dep: python3-numpy (>= 1:1.25.0)

  Fast array facility to the Python language (Python 3)

• dep: python3-numpy-abi9

  sanal paketi sağlayan python3-numpy

python3-cyvcf2 indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	0.31.1-2+b1	1.003,2 kB	6.414,0 kB	[dosya listesi]
arm64	0.31.1-2+b1	932,5 kB	6.198,0 kB	[dosya listesi]
armel	0.31.1-2+b1	945,0 kB	6.216,0 kB	[dosya listesi]
armhf	0.31.1-2+b1	951,4 kB	5.804,0 kB	[dosya listesi]
i386	0.31.1-2+b1	993,0 kB	6.506,0 kB	[dosya listesi]
mips64el	0.31.1-2+b1	893,3 kB	6.360,0 kB	[dosya listesi]
ppc64el	0.31.1-2+b1	962,0 kB	6.582,0 kB	[dosya listesi]
riscv64	0.31.1-2+b1	986,7 kB	5.968,0 kB	[dosya listesi]
s390x	0.31.1-2+b1	964,9 kB	6.356,0 kB	[dosya listesi]