Paket: python3-cyvcf2 (0.31.1-2 ve diğerleri)

[ Kaynak: cyvcf2  ]

VCF parser based on htslib (Python 3)

This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.

cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.

This package installs the library for Python 3.

python3-cyvcf2 ile İlgili Diğer Paketler

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.7) [amd64, arm64, ppc64el, riscv64 değil]

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.14)

  dep: python3 (>= 3.13~)

• dep: python3-click

  Command-Line Interface Creation Kit - Python 3.x

• dep: python3-coloredlogs

  colored terminal output for Python 3's logging module

• dep: python3-numpy

  Python library for numerical computations (Python 3)

• dep: python3-numpy2-abi0

  sanal paketi sağlayan python3-numpy

  ya da python3-numpy-abi9

  Paket mevcut değil

python3-cyvcf2 indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	0.31.1-2+b3	886,6 kB	5.624,0 kB	[dosya listesi]
arm64	0.31.1-2+b3	849,1 kB	5.559,0 kB	[dosya listesi]
armel	0.31.1-2+b3	848,3 kB	5.549,0 kB	[dosya listesi]
armhf	0.31.1-2+b3	852,8 kB	5.357,0 kB	[dosya listesi]
i386	0.31.1-2+b4	881,9 kB	5.645,0 kB	[dosya listesi]
mips64el	0.31.1-2+b3	825,7 kB	5.642,0 kB	[dosya listesi]
ppc64el	0.31.1-2+b3	874,6 kB	5.751,0 kB	[dosya listesi]
riscv64	0.31.1-2+b3	883,3 kB	5.403,0 kB	[dosya listesi]
s390x	0.31.1-2+b3	864,6 kB	5.594,0 kB	[dosya listesi]