Paket: python3-cyvcf2 (0.10.4-1)

[ Kaynak: cyvcf2  ]

VCF parser based on htslib (Python 3)

This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.

cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.

This package installs the library for Python 3.

python3-cyvcf2 ile İlgili Diğer Paketler

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.7) [armhf, i386]

• dep: libcurl3-gnutls (>= 7.16.2)

  easy-to-use client-side URL transfer library (GnuTLS flavour)

• dep: libhts2 (>= 1.2.1)

  C library for high-throughput sequencing data formats

• dep: liblzma5 (>= 5.1.1alpha+20110809)

  XZ-format compression library

• dep: libssl1.1 (>= 1.1.0)

  Secure Sockets Layer toolkit - shared libraries

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.8)

  dep: python3 (>= 3.7~)

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

• sug: python-cyvcf2-doc

  Paket mevcut değil

python3-cyvcf2 indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	782,5 kB	4.575,0 kB	[dosya listesi]
arm64	735,4 kB	4.525,0 kB	[dosya listesi]
armhf	757,4 kB	4.315,0 kB	[dosya listesi]
i386	755,2 kB	4.580,0 kB	[dosya listesi]