Paket: blixem (4.44.1+dfsg-7.1 och andra)

[ Källkod: seqtools  ]

interactive browser of sequence alignments

Blixem is an interactive browser of sequence alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment.

 * Overview section showing the positions of genes and alignments around
   the alignment window
 * Detail section showing the actual alignment of protein or nucleotide
   sequences to the genomic DNA sequence.
 * View alignments against both strands of the reference sequence.
 * View sequences in nucleotide or protein mode; in protein mode, Blixem
   will display the three-frame translation of the reference sequence.
 * Residues are highlighted in different colours depending on whether
   they are an exact match, conserved substitution or mismatch.
 * Gapped alignments are supported, with insertions and deletions being
   highlighted in the match sequence.
 * Matches can be sorted and filtered.
 * SNPs and other variations can be highlighted in the reference
   sequence.
 * Poly(A) tails can be displayed and poly(A) signals highlighted in the
   reference sequence.

Märken: Interface Toolkit: GTK

Andra paket besläktade med blixem

• dep: libatk1.0-0t64 (>= 1.12.4) [sparc64]

  ATK accessibility toolkit

• dep: libc6 (>= 2.34) [ej alpha, ia64, sh4]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libcairo2 (>= 1.2.4)

  Cairo 2D vector graphics library

• dep: libcurl4 (>= 7.16.2) [alpha, ia64, ppc64, sparc64, x32]

  easy-to-use client-side URL transfer library (OpenSSL flavour)

• dep: libcurl4t64 (>= 7.16.2) [ej alpha, ia64, ppc64, sparc64, x32]

  easy-to-use client-side URL transfer library (OpenSSL flavour)

• dep: libfontconfig1 (>= 2.12.6) [sparc64]

  generic font configuration library - runtime

• dep: libfreetype6 (>= 2.2.1) [sparc64]

  FreeType 2 font engine, shared library files

• dep: libgbtools0t64 (>= 4.44.1+dfsg)

  library for visualising sequence alignments

• dep: libgcc-s1 (>= 3.0) [ej armel, armhf, hppa, ia64, m68k]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC stödbibliotek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC stödbibliotek

• dep: libgdk-pixbuf-2.0-0 (>= 2.22.0) [sparc64]

  GDK Pixbuf library

• dep: libglib2.0-0t64 (>= 2.75.3)

  GLib library of C routines

• dep: libgtk2.0-0 (>= 2.14.0) [alpha, sparc64]

  GTK graphical user interface library - old version

• dep: libgtk2.0-0t64 (>= 2.14.0) [ej alpha, sparc64]

  GTK graphical user interface library - old version

• dep: libharfbuzz0b (>= 0.6.0) [sparc64]

  OpenType text shaping engine (shared library)

• dep: libjsoncpp25 (>= 1.9.5) [sparc64]

  library for reading and writing JSON for C++

• dep: libpango-1.0-0 (>= 1.14.0)

  Layout and rendering of internationalized text

• dep: libpangocairo-1.0-0 (>= 1.14.0) [sparc64]

  Layout and rendering of internationalized text

• dep: libpangoft2-1.0-0 (>= 1.14.0) [sparc64]

  Layout and rendering of internationalized text

• dep: libsqlite3-0 (>= 3.5.9)

  SQLite 3 shared library

• dep: libstdc++6 (>= 5.2)

  GNU standardbibliotek v3 för C++

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

Hämta blixem

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
alpha (inofficiell anpassning)	4.44.1+dfsg-7.1	1.327,0 kbyte	2.429,0 kbyte	[filförteckning]
amd64	4.44.1+dfsg-7.1+b1	1.347,5 kbyte	2.220,0 kbyte	[filförteckning]
arm64	4.44.1+dfsg-7.1+b1	1.314,2 kbyte	2.290,0 kbyte	[filförteckning]
armel	4.44.1+dfsg-7.1+b1	1.292,4 kbyte	2.060,0 kbyte	[filförteckning]
armhf	4.44.1+dfsg-7.1+b1	1.298,9 kbyte	1.820,0 kbyte	[filförteckning]
hppa (inofficiell anpassning)	4.44.1+dfsg-7.1	1.333,3 kbyte	2.197,0 kbyte	[filförteckning]
i386	4.44.1+dfsg-7.1+b1	1.360,8 kbyte	2.356,0 kbyte	[filförteckning]
ia64 (inofficiell anpassning)	4.44.1+dfsg-7.1	1.378,9 kbyte	3.243,0 kbyte	[filförteckning]
m68k (inofficiell anpassning)	4.44.1+dfsg-7.1	1.339,1 kbyte	2.245,0 kbyte	[filförteckning]
mips64el	4.44.1+dfsg-7.1+b1	1.340,2 kbyte	2.634,0 kbyte	[filförteckning]
ppc64 (inofficiell anpassning)	4.44.1+dfsg-7.1	1.346,7 kbyte	2.675,0 kbyte	[filförteckning]
ppc64el	4.44.1+dfsg-7.1+b1	1.346,5 kbyte	2.548,0 kbyte	[filförteckning]
riscv64	4.44.1+dfsg-7.1+b1	1.340,1 kbyte	2.020,0 kbyte	[filförteckning]
s390x	4.44.1+dfsg-7.1+b1	1.322,3 kbyte	2.266,0 kbyte	[filförteckning]
sh4 (inofficiell anpassning)	4.44.1+dfsg-7.1	1.361,6 kbyte	2.227,0 kbyte	[filförteckning]
sparc64 (inofficiell anpassning)	4.44.1+dfsg-7.1	1.295,2 kbyte	3.224,0 kbyte	[filförteckning]
x32 (inofficiell anpassning)	4.44.1+dfsg-7.1	1.348,7 kbyte	2.155,0 kbyte	[filförteckning]