Pakket: lagan (2.0-10 en anderen)

[ Bron: lagan  ]

highly parametrizable pairwise global genome sequence aligner

Lagan takes local alignments generated by CHAOS as anchors, and limits the search area of the Needleman-Wunsch algorithm around these anchors.

Multi-LAGAN is a generalization of the pairwise algorithm to multiple sequence alignment. M-LAGAN performs progressive pairwise alignments, guided by a user-specified phylogenetic tree. Alignments are aligned to other alignments using the sum-of-pairs metric.

Andere aan lagan gerelateerde pakketten

• dep: libc6 (>= 2.34) [niet alpha, arm64, ia64, loong64, sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.37) [loong64, sh4]

  dep: libc6 (>= 2.38) [arm64]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [amd64, arm64, i386, loong64, mips64el, ppc64, ppc64el, s390x, x32]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support bibliotheek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support bibliotheek

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

lagan downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	2.0-10	178,8 kB	1.898,0 kB	[overzicht]
amd64	2.0-10	179,9 kB	834,0 kB	[overzicht]
arm64	2.0-10+b1	173,2 kB	1.771,0 kB	[overzicht]
armel	2.0-10	163,2 kB	691,0 kB	[overzicht]
armhf	2.0-10	162,4 kB	583,0 kB	[overzicht]
hppa (unofficial port)	2.0-10	174,6 kB	716,0 kB	[overzicht]
i386	2.0-10	186,7 kB	831,0 kB	[overzicht]
ia64 (unofficial port)	2.0-10	213,5 kB	1.035,0 kB	[overzicht]
loong64 (unofficial port)	2.0-10	173,5 kB	890,0 kB	[overzicht]
m68k (unofficial port)	2.0-10	155,6 kB	683,0 kB	[overzicht]
mips64el	2.0-10	182,3 kB	1.924,0 kB	[overzicht]
ppc64 (unofficial port)	2.0-10	190,5 kB	2.034,0 kB	[overzicht]
ppc64el	2.0-10	199,0 kB	1.898,0 kB	[overzicht]
riscv64	2.0-10	180,8 kB	682,0 kB	[overzicht]
s390x	2.0-10	186,6 kB	802,0 kB	[overzicht]
sh4 (unofficial port)	2.0-10	179,3 kB	1.747,0 kB	[overzicht]
sparc64 (unofficial port)	2.0-10	166,3 kB	23.868,0 kB	[overzicht]
x32 (unofficial port)	2.0-10	174,9 kB	796,0 kB	[overzicht]