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[ Source: lagan  ]

Package: lagan (2.0-10 and others)

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Parameteropsat parvist og globalt sammenligningsprogram for genomsekvenser

Lagan bruger lokale sammenligninger oprettet af CHAOS som ankre, og begrænser søgeområdet for Needleman-Wunsch-algoritmen omkring disse ankre.

Multi-LAGAN er en generalisering af den parvise algoritme til flere sekvenssammenligninger. M-LAGAN udfører progressive parvise sammenligninger, vejledt af et af brugeren angivet fylogenetisk træ. Sammenligninger justeres til andre sammenligninger via målingen »sum-of-pairs«.

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Download lagan

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 2.0-10 178.8 kB1,898.0 kB [list of files]
amd64 2.0-10 179.9 kB834.0 kB [list of files]
arm64 2.0-10+b1 173.2 kB1,771.0 kB [list of files]
armel 2.0-10 163.2 kB691.0 kB [list of files]
armhf 2.0-10 162.4 kB583.0 kB [list of files]
hppa (unofficial port) 2.0-10 174.6 kB716.0 kB [list of files]
i386 2.0-10 186.7 kB831.0 kB [list of files]
ia64 (unofficial port) 2.0-10 213.5 kB1,035.0 kB [list of files]
m68k (unofficial port) 2.0-10 155.6 kB683.0 kB [list of files]
mips64el 2.0-10 182.3 kB1,924.0 kB [list of files]
ppc64 (unofficial port) 2.0-10 190.5 kB2,034.0 kB [list of files]
ppc64el 2.0-10 199.0 kB1,898.0 kB [list of files]
riscv64 2.0-10 180.8 kB682.0 kB [list of files]
s390x 2.0-10 186.6 kB802.0 kB [list of files]
sh4 (unofficial port) 2.0-10 179.3 kB1,747.0 kB [list of files]
sparc64 (unofficial port) 2.0-10 166.3 kB23,868.0 kB [list of files]
x32 (unofficial port) 2.0-10 174.9 kB796.0 kB [list of files]