Pakket: kalign (1:3.4.0-1)

[ Bron: kalign  ]

Global and progressive multiple sequence alignment

Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

Andere aan kalign gerelateerde pakketten

• dep: libc6 (>= 2.34) [niet alpha, ia64, sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• enh: bioperl-run

  BioPerl wrappers: scripts

• enh: t-coffee

  Multiple Sequence Alignment

kalign downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	85,7 kB	408,0 kB	[overzicht]
amd64	134,4 kB	1.126,0 kB	[overzicht]
arm64	83,7 kB	406,0 kB	[overzicht]
armel	79,2 kB	304,0 kB	[overzicht]
armhf	76,9 kB	244,0 kB	[overzicht]
hppa (unofficial port)	83,3 kB	323,0 kB	[overzicht]
i386	88,1 kB	340,0 kB	[overzicht]
ia64 (unofficial port)	105,1 kB	557,0 kB	[overzicht]
m68k (unofficial port)	80,4 kB	292,0 kB	[overzicht]
mips64el	82,0 kB	420,0 kB	[overzicht]
ppc64 (unofficial port)	91,3 kB	470,0 kB	[overzicht]
ppc64el	99,4 kB	470,0 kB	[overzicht]
riscv64	88,3 kB	286,0 kB	[overzicht]
s390x	96,2 kB	370,0 kB	[overzicht]
sh4 (unofficial port)	88,4 kB	277,0 kB	[overzicht]
sparc64 (unofficial port)	75,2 kB	2.137,0 kB	[overzicht]
x32 (unofficial port)	91,4 kB	328,0 kB	[overzicht]