Package: nanopolish (0.14.0-1 and others)

[ Source: nanopolish  ]

consensus caller for nanopore sequencing data

Nanopolish uses a signal-level hidden Markov model for consensus calling of nanopore genome sequencing data. It can perform signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and more.

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Download nanopolish

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	0.14.0-1+b2	2,138.2 kB	9,862.0 kB	[list of files]
amd64	0.14.0-1+b3	2,149.9 kB	9,639.0 kB	[list of files]
arm64	0.14.0-1+b3	2,079.4 kB	9,475.0 kB	[list of files]
armel	0.14.0-1+b2	2,085.0 kB	9,533.0 kB	[list of files]
armhf	0.14.0-1+b2	2,090.4 kB	9,129.0 kB	[list of files]
hppa (unofficial port)	0.14.0-1+b2	2,140.7 kB	9,757.0 kB	[list of files]
i386	0.14.0-1+b2	2,171.1 kB	9,713.0 kB	[list of files]
ia64 (unofficial port)	0.14.0-1+b1	2,281.9 kB	10,820.0 kB	[list of files]
m68k (unofficial port)	0.14.0-1+b2	2,118.0 kB	9,409.0 kB	[list of files]
mips64el	0.14.0-1+b2	2,106.0 kB	9,846.0 kB	[list of files]
ppc64 (unofficial port)	0.13.3-2	2,208.6 kB	9,987.0 kB	[list of files]
ppc64el	0.14.0-1+b2	2,150.9 kB	9,859.0 kB	[list of files]
riscv64	0.14.0-1+b3	2,144.4 kB	9,315.0 kB	[list of files]
sh4 (unofficial port)	0.14.0-1+b2	2,260.5 kB	9,603.0 kB	[list of files]
sparc64 (unofficial port)	0.5.0-1+b1	1,799.8 kB	3,490.0 kB	[list of files]
x32 (unofficial port)	0.14.0-1+b3	2,151.4 kB	9,553.0 kB	[list of files]