[ Source: murasaki ]
Package: murasaki (1.68.6-14 and others)
Links for murasaki
Debian Resources:
Download Source Package murasaki:
- [murasaki_1.68.6-14.dsc]
- [murasaki_1.68.6.orig-debian-tests-data.tar.gz]
- [murasaki_1.68.6.orig.tar.gz]
- [murasaki_1.68.6-14.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [murasaki.dna.bio.keio.ac.jp]
Similar packages:
homology detection tool across multiple large genomes
Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 52 wall minutes)) * scalable (Arbitrarily parallelizable across multiple nodes using MPI. Even a single node with 16GB of ram can handle over 1Gbp of sequence.) * unlimited pattern length * repeat tolerant * intelligent noise reduction
Other Packages Related to murasaki
|
|
|
|
-
- dep: libboost-filesystem1.83.0 (>= 1.83.0)
- Operaciones de sistema de archivos (rutas adaptables, iteración sobre directorios, etc) en C++
-
- dep: libboost-iostreams1.83.0 (>= 1.83.0)
- biblioteca Boost.Iostreams
-
- dep: libc6 (>= 2.38) [not alpha, ia64, sh4]
- Biblioteca de C de GNU: Bibliotecas compartidas
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.40) [sh4]
-
- dep: libc6.1 (>= 2.37) [ia64]
- Biblioteca de C de GNU: Bibliotecas compartidas
also a virtual package provided by libc6.1-udeb
- dep: libc6.1 (>= 2.38) [alpha]
-
- dep: libgcc-s1 (>= 3.0) [amd64, arm64, i386, mips64el, ppc64, ppc64el, s390x, x32]
- Biblioteca de ayuda de GCC
- dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [ia64]
-
- dep: libgcc-s2 (>= 4.2.1) [m68k]
- Biblioteca de ayuda de GCC
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- Biblioteca de ayuda de GCC
-
- dep: libstdc++6 (>= 13.1) [ia64, m68k]
- biblioteca estándar de C++ de GNU v3
- dep: libstdc++6 (>= 14) [not ia64, m68k]
-
- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
-
- dep: murasaki-common
- homology detection tool across multiple large genomes (common files)
Download murasaki
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 1.68.6-14+b1 | 597.4 kB | 4,978.0 kB | [list of files] |
| amd64 | 1.68.6-14+b1 | 629.6 kB | 4,400.0 kB | [list of files] |
| arm64 | 1.68.6-14+b1 | 543.3 kB | 4,319.0 kB | [list of files] |
| armel | 1.68.6-14 | 452.9 kB | 3,326.0 kB | [list of files] |
| armhf | 1.68.6-14 | 462.8 kB | 2,350.0 kB | [list of files] |
| hppa (unofficial port) | 1.68.6-14 | 586.1 kB | 3,991.0 kB | [list of files] |
| i386 | 1.68.6-14 | 638.5 kB | 4,166.0 kB | [list of files] |
| ia64 (unofficial port) | 1.68.6-13+b5 | 658.9 kB | 8,435.0 kB | [list of files] |
| m68k (unofficial port) | 1.68.6-14 | 483.4 kB | 3,566.0 kB | [list of files] |
| mips64el | 1.68.6-14+b1 | 596.1 kB | 5,866.0 kB | [list of files] |
| ppc64 (unofficial port) | 1.68.6-14+b1 | 603.4 kB | 5,792.0 kB | [list of files] |
| ppc64el | 1.68.6-14+b1 | 606.8 kB | 5,600.0 kB | [list of files] |
| riscv64 | 1.68.6-14+b1 | 584.6 kB | 3,203.0 kB | [list of files] |
| s390x | 1.68.6-14+b1 | 606.9 kB | 4,827.0 kB | [list of files] |
| sh4 (unofficial port) | 1.68.6-14 | 515.2 kB | 3,657.0 kB | [list of files] |
| sparc64 (unofficial port) | 1.68.6-14+b1 | 506.6 kB | 13,459.0 kB | [list of files] |
| x32 (unofficial port) | 1.68.6-14 | 602.5 kB | 3,978.0 kB | [list of files] |