Package: kleborate (2.4.1-5 and others)

[ Source: kleborate  ]

Værktøj til at screene Klebsiella-genomsamlinger

Kleborate er et værktj til at screene Klebsiella-genomsamlinger for:

 * MLST-sekvenstype
 * arter (f.eks. K. pneumoniae, K. quasipneumoniae, K. variicola, etc.)
 * ICEKp-associeret virulence loci: yersiniabactin (ybt),
   colibactin (clb)
 * virulence plasmidassocieret loci: salmochelin (iro), aerobactin
   (iuc), hypermucoidy (rmpA, rmpA2)
 * antimikrobiologisk resistensgener, inklusive quinoloneresistens-SNP'er
   og trunkeringer mod colistinresistens
 * K (capsule) og O antigen (LPS) serotypeforudsigelse, via wzi alleles
   og Kaptive

Other Packages Related to kleborate

• dep: kaptive

  Indhent information om K- og O-typer for Klebsiella-genomsamlinger

• dep: kaptive-data

  Referencedata for kaptive for Klebsiella-genomsamlinger

• dep: mash

  Hurtig genom- og metagenomafstandsestimering via MinHash

• dep: ncbi-blast+

  Næste generation programpakke for BLAST-sekvens søgeværktøjer

• dep: python3

  Interaktivt objektorienteret højniveausprog - standardversion af Python 3

• dep: python3-biopython

  Python 3-bibliotek for bioinformatik

• dep: python3-distutils [m68k]

  Package not available

• dep: python3-pkg-resources [not alpha, m68k, ppc64]

  Pakkesøgning og ressourceadgang med brug af pkg_resources

Download kleborate

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.4.1-3	7,558.8 kB	62,170.0 kB	[list of files]
amd64	2.4.1-5	7,559.6 kB	62,170.0 kB	[list of files]
arm64	2.4.1-5	7,559.6 kB	62,170.0 kB	[list of files]
loong64 (unofficial port)	2.4.1-5	7,559.6 kB	62,170.0 kB	[list of files]
m68k (unofficial port)	2.1.0-2	7,518.1 kB	61,504.0 kB	[list of files]
mips64el	2.4.1-5	7,559.6 kB	62,170.0 kB	[list of files]
ppc64 (unofficial port)	2.4.1-3	7,555.3 kB	62,001.0 kB	[list of files]
ppc64el	2.4.1-5	7,559.6 kB	62,170.0 kB	[list of files]
riscv64	2.4.1-5	7,559.6 kB	62,170.0 kB	[list of files]
s390x	2.4.1-5	7,558.5 kB	62,001.0 kB	[list of files]