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[ 原始碼: damapper  ]

套件:damapper(0.0+git20240314.b025cf9-1 以及其他的)

damapper 的相關連結

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long read to reference genome mapping tool

Recognised as the Damapper Library, this is a long read to reference genome mapping command line tool.

For a given reference database 'X' and read block 'Y', damapper produces the single file 'Y.X.las'. Each output file is sorted in order of the A-reads, and if a match is a chain of local alignments, then the LA's in the chain occur in increasing order of A-coordinates.

HPC.damapper writes a UNIX shell script to the standard output that maps every read in blocks <first> to <last> of database <reads> to a reference sequence <ref>. If <last> is missing then only the single block <first> is mapped, and if <first> is also missing then all blocks of the database are mapped.

This package contains the damapper and HPC.damapper binaries.

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下載可用於所有硬體架構的
硬體架構 版本 套件大小 安裝後大小 檔案
alpha (非官方移植版) 0.0+git20240314.b025cf9-1 104。9 kB428。0 kB [檔案列表]
amd64 0.0+git20240314.b025cf9-1 109。3 kB316。0 kB [檔案列表]
arm64 0.0+git20240314.b025cf9-1 96。8 kB364。0 kB [檔案列表]
armel 0.0+git20240314.b025cf9-1 98。1 kB302。0 kB [檔案列表]
armhf 0.0+git20240314.b025cf9-1 97。4 kB226。0 kB [檔案列表]
hppa (非官方移植版) 0.0+git20240314.b025cf9-1 103。7 kB308。0 kB [檔案列表]
i386 0.0+git20240314.b025cf9-1 109。5 kB346。0 kB [檔案列表]
ia64 (非官方移植版) 0.0+git20210330.ab45103-2 128。4 kB549。0 kB [檔案列表]
m68k (非官方移植版) 0.0+git20240314.b025cf9-1 95。0 kB298。0 kB [檔案列表]
mips64el 0.0+git20240314.b025cf9-1 100。2 kB437。0 kB [檔案列表]
ppc64 (非官方移植版) 0.0+git20240314.b025cf9-1 111。2 kB428。0 kB [檔案列表]
ppc64el 0.0+git20240314.b025cf9-1 112。4 kB428。0 kB [檔案列表]
riscv64 0.0+git20240314.b025cf9-1 106。6 kB248。0 kB [檔案列表]
s390x 0.0+git20240314.b025cf9-1 116。5 kB336。0 kB [檔案列表]
sh4 (非官方移植版) 0.0+git20240314.b025cf9-1 120。6 kB298。0 kB [檔案列表]
sparc64 (非官方移植版) 0.0+git20240314.b025cf9-1 95。8 kB2,094。0 kB [檔案列表]
x32 (非官方移植版) 0.0+git20240314.b025cf9-1 106。3 kB298。0 kB [檔案列表]