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[ 源代码: damapper  ]

软件包:damapper(0.0+git20240314.b025cf9-1 以及其他的)

damapper 的相关链接

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long read to reference genome mapping tool

Recognised as the Damapper Library, this is a long read to reference genome mapping command line tool.

For a given reference database 'X' and read block 'Y', damapper produces the single file 'Y.X.las'. Each output file is sorted in order of the A-reads, and if a match is a chain of local alignments, then the LA's in the chain occur in increasing order of A-coordinates.

HPC.damapper writes a UNIX shell script to the standard output that maps every read in blocks <first> to <last> of database <reads> to a reference sequence <ref>. If <last> is missing then only the single block <first> is mapped, and if <first> is also missing then all blocks of the database are mapped.

This package contains the damapper and HPC.damapper binaries.

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下载 damapper

下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
alpha (非官方移植版) 0.0+git20240314.b025cf9-1 104.9 kB428.0 kB [文件列表]
amd64 0.0+git20240314.b025cf9-1 109.3 kB316.0 kB [文件列表]
arm64 0.0+git20240314.b025cf9-1 96.8 kB364.0 kB [文件列表]
armel 0.0+git20240314.b025cf9-1 98.1 kB302.0 kB [文件列表]
armhf 0.0+git20240314.b025cf9-1 97.4 kB226.0 kB [文件列表]
hppa (非官方移植版) 0.0+git20240314.b025cf9-1 103.7 kB308.0 kB [文件列表]
i386 0.0+git20240314.b025cf9-1 109.5 kB346.0 kB [文件列表]
ia64 (非官方移植版) 0.0+git20210330.ab45103-2 128.4 kB549.0 kB [文件列表]
loong64 (非官方移植版) 0.0+git20240314.b025cf9-1 99.6 kB316.0 kB [文件列表]
m68k (非官方移植版) 0.0+git20240314.b025cf9-1 95.0 kB298.0 kB [文件列表]
mips64el 0.0+git20240314.b025cf9-1 100.2 kB437.0 kB [文件列表]
ppc64 (非官方移植版) 0.0+git20240314.b025cf9-1 111.2 kB428.0 kB [文件列表]
ppc64el 0.0+git20240314.b025cf9-1 112.4 kB428.0 kB [文件列表]
riscv64 0.0+git20240314.b025cf9-1 106.6 kB248.0 kB [文件列表]
s390x 0.0+git20240314.b025cf9-1 116.5 kB336.0 kB [文件列表]
sh4 (非官方移植版) 0.0+git20240314.b025cf9-1 120.6 kB298.0 kB [文件列表]
sparc64 (非官方移植版) 0.0+git20240314.b025cf9-1 95.8 kB2,094.0 kB [文件列表]
x32 (非官方移植版) 0.0+git20240314.b025cf9-1 106.3 kB298.0 kB [文件列表]