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[ 源代码: libseqlib  ]

软件包:libseqlib2(1.2.0+dfsg-11 以及其他的)

libseqlib2 的相关链接

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Debian 的资源:

下载源码包 libseqlib

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外部的资源:

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C++ htslib/bwa-mem/fermi interface for interrogating sequence data

C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.

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下载 libseqlib2

下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
alpha (非官方移植版) 1.2.0+dfsg-11+b2 150.7 kB537.0 kB [文件列表]
amd64 1.2.0+dfsg-11+b2 167.9 kB565.0 kB [文件列表]
arm64 1.2.0+dfsg-11+b2 142.7 kB533.0 kB [文件列表]
armel 1.2.0+dfsg-11+b2 135.3 kB435.0 kB [文件列表]
armhf 1.2.0+dfsg-11+b2 138.4 kB335.0 kB [文件列表]
i386 1.2.0+dfsg-11+b2 177.2 kB511.0 kB [文件列表]
ia64 (非官方移植版) 1.2.0+dfsg-11+b1 192.3 kB885.0 kB [文件列表]
m68k (非官方移植版) 1.2.0+dfsg-11+b2 150.6 kB467.0 kB [文件列表]
mips64el 1.2.0+dfsg-11+b2 141.1 kB556.0 kB [文件列表]
ppc64 (非官方移植版) 1.2.0+dfsg-11+b2 165.1 kB661.0 kB [文件列表]
ppc64el 1.2.0+dfsg-11+b2 167.0 kB597.0 kB [文件列表]
riscv64 1.2.0+dfsg-11+b2 156.6 kB396.0 kB [文件列表]
s390x 1.2.0+dfsg-11+b2 157.8 kB512.0 kB [文件列表]
sh4 (非官方移植版) 1.2.0+dfsg-11+b2 182.0 kB470.0 kB [文件列表]
sparc64 (非官方移植版) 1.2.0+dfsg-11+b2 129.4 kB1,059.0 kB [文件列表]
x32 (非官方移植版) 1.2.0+dfsg-11+b2 164.2 kB475.0 kB [文件列表]