Paket: tvc (5.0.3+git20151221.80e144e+dfsg-5 ve diğerleri)

[ Kaynak: tvc  ]

genetic variant caller for Ion Torrent sequencing platforms

Torrent Variant Caller (TVC) is a genetic variant caller for Ion Torrent sequencing platforms, and is specially optimized to exploit the underlying flow signal information in the statistical model to evaluate variants. Torrent Variant Caller is designed to call single-nucleotide polymorphisms (SNPs), multi-nucleotide polymorphisms (MNPs), insertions, deletions, and block substitutions.

tvc ile İlgili Diğer Paketler

• dep: libarmadillo12 (>= 1:12.6.1+dfsg) [ia64]

  streamlined C++ linear algebra library

• dep: libarmadillo14 (>= 1:14.0.1+dfsg) [ia64 değil]

  streamlined C++ linear algebra library

• dep: libbamtools2.5.2 (>= 2.5.2+dfsg)

  dynamic library for manipulating BAM (genome alignment) files

• dep: libblas3 [sparc64]

  Basic Linear Algebra Reference implementations, shared library

  ya da libblas.so.3

  sanal paketi sağlayan libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.38) [alpha, ia64, sh4 değil]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.40) [sh4]

• dep: libc6.1 (>= 2.37) [ia64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

  dep: libc6.1 (>= 2.38) [alpha]

• dep: libdisorder0 (>= 0.0.2)

  library for entropy measurement of byte streams

• dep: libgcc-s1 (>= 3.0) [amd64, arm64, i386, mips64el, s390x, x32]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]

  dep: libgcc-s1 (>= 3.4.4) [ppc64, ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libjsoncpp25 (>= 1.9.5) [ia64]

  library for reading and writing JSON for C++

• dep: libjsoncpp26 (>= 1.9.6) [ia64 değil]

  library for reading and writing JSON for C++

• dep: liblapack3 [sparc64]

  Library of linear algebra routines 3 - shared version

  ya da liblapack.so.3

  sanal paketi sağlayan libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

  determine similar regions between two strings or genomic sequences (lib)

• dep: libstdc++6 (>= 13.1) [alpha değil]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 14.2.0-2) [alpha]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

tvc indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	5.0.3+git20151221.80e144e+dfsg-5+b3	1.037,8 kB	3.734,0 kB	[dosya listesi]
amd64	5.0.3+git20151221.80e144e+dfsg-5+b3	1.088,5 kB	3.505,0 kB	[dosya listesi]
arm64	5.0.3+git20151221.80e144e+dfsg-5+b3	992,7 kB	3.349,0 kB	[dosya listesi]
armel	5.0.3+git20151221.80e144e+dfsg-5+b3	963,5 kB	3.177,0 kB	[dosya listesi]
armhf	5.0.3+git20151221.80e144e+dfsg-5+b3	977,4 kB	2.697,0 kB	[dosya listesi]
hppa (resmi olmayan port)	5.0.3+git20151221.80e144e+dfsg-5+b3	1.016,8 kB	3.219,0 kB	[dosya listesi]
i386	5.0.3+git20151221.80e144e+dfsg-5+b3	1.117,9 kB	3.544,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	5.0.3+git20151221.80e144e+dfsg-5+b1	1.176,5 kB	5.139,0 kB	[dosya listesi]
m68k (resmi olmayan port)	5.0.3+git20151221.80e144e+dfsg-5+b3	952,2 kB	3.208,0 kB	[dosya listesi]
mips64el	5.0.3+git20151221.80e144e+dfsg-5+b3	1.003,8 kB	3.751,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	5.0.3+git20151221.80e144e+dfsg-5+b3	1.056,5 kB	3.870,0 kB	[dosya listesi]
ppc64el	5.0.3+git20151221.80e144e+dfsg-5+b3	1.067,7 kB	3.732,0 kB	[dosya listesi]
riscv64	5.0.3+git20151221.80e144e+dfsg-5+b3	1.048,0 kB	2.913,0 kB	[dosya listesi]
s390x	5.0.3+git20151221.80e144e+dfsg-5+b3	1.061,0 kB	3.520,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	5.0.3+git20151221.80e144e+dfsg-5+b3	1.061,5 kB	3.088,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	5.0.3+git20151221.80e144e+dfsg-5+b3	959,0 kB	5.541,0 kB	[dosya listesi]
x32 (resmi olmayan port)	5.0.3+git20151221.80e144e+dfsg-5+b3	1.077,6 kB	3.379,0 kB	[dosya listesi]