Paket: tvc (5.0.3+git20151221.80e144e+dfsg-2)

[ Kaynak: tvc  ]

genetic variant caller for Ion Torrent sequencing platforms

Torrent Variant Caller (TVC) is a genetic variant caller for Ion Torrent sequencing platforms, and is specially optimized to exploit the underlying flow signal information in the statistical model to evaluate variants. Torrent Variant Caller is designed to call single-nucleotide polymorphisms (SNPs), multi-nucleotide polymorphisms (MNPs), insertions, deletions, and block substitutions.

tvc ile İlgili Diğer Paketler

• dep: libarmadillo9 (>= 1:9.200.6+dfsg)

  streamlined C++ linear algebra library

• dep: libbamtools2.5.1

  dynamic library for manipulating BAM (genome alignment) files

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  ya da libblas.so.3

  sanal paketi sağlayan libatlas3-base, libblas3, libblis2-openmp, libblis2-pthread, libblis2-serial, libopenblas-base

• dep: libc6 (>= 2.27)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libdisorder0 (>= 0.0.2)

  library for entropy measurement of byte streams

• dep: libgcc1 (>= 1:3.0) [amd64, i386]

  GCC support library

  dep: libgcc1 (>= 1:3.5) [armhf]

  dep: libgcc1 (>= 1:4.5) [arm64]

• dep: libjsoncpp1 (>= 1.7.4)

  library for reading and writing JSON for C++

• dep: liblapack3

  Library of linear algebra routines 3 - shared version

  ya da liblapack.so.3

  sanal paketi sağlayan libatlas3-base, liblapack3, libopenblas-base

• dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

  determine similar regions between two strings or genomic sequences (lib)

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: python

  interactive high-level object-oriented language (Python2 version)

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

tvc indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	1.033,9 kB	3.316,0 kB	[dosya listesi]
arm64	966,0 kB	3.117,0 kB	[dosya listesi]
armhf	935,2 kB	2.581,0 kB	[dosya listesi]
i386	1.064,7 kB	3.372,0 kB	[dosya listesi]