[ Källkod: r-bioc-variantannotation ]
Paket: r-bioc-variantannotation (1.50.0-1 och andra)
Länkar för r-bioc-variantannotation
Debianresurser:
Hämta källkodspaketet r-bioc-variantannotation:
- [r-bioc-variantannotation_1.50.0-1.dsc]
- [r-bioc-variantannotation_1.50.0.orig.tar.gz]
- [r-bioc-variantannotation_1.50.0-1.debian.tar.xz]
Ansvariga:
Externa resurser:
- Hemsida [bioconductor.org]
Liknande paket:
BioConductor annotation of genetic variants
This BioConductor package provides R functions to annotate variants, compute amino acid coding changess and to predict coding outcomes.
Andra paket besläktade med r-bioc-variantannotation
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- dep: libbz2-1.0 [ej hppa, m68k, sh4, sparc64, x32]
- high-quality block-sorting file compressor library - runtime
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- dep: libc6 (>= 2.15) [m68k, sparc64]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
- dep: libc6 (>= 2.34) [ej alpha, ia64, m68k, sh4, sparc64]
- dep: libc6 (>= 2.37) [sh4]
-
- dep: libc6.1 (>= 2.34) [alpha]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
-
- dep: libcurl4 (>= 7.18.0) [hppa, ia64, sh4, x32]
- easy-to-use client-side URL transfer library (OpenSSL flavour)
-
- dep: libcurl4t64 (>= 7.18.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
- easy-to-use client-side URL transfer library (OpenSSL flavour)
-
- dep: liblzma5 (>= 5.1.1alpha+20120614) [ej hppa, m68k, sh4, sparc64, x32]
- XZ-format compression library
-
- dep: r-api-3.4 [m68k]
- Paketet inte tillgängligt
-
- dep: r-api-3.5 [sparc64]
- Paketet inte tillgängligt
-
- dep: r-api-4.0 [ej m68k, sparc64]
- virtuellt paket som tillhandahålls av r-base-core
-
- dep: r-api-bioc-3.16 [x32]
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- dep: r-api-bioc-3.18 [hppa, ia64, sh4]
- Paketet inte tillgängligt
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- dep: r-api-bioc-3.19 [ej hppa, ia64, m68k, sh4, sparc64, x32]
- virtuellt paket som tillhandahålls av r-bioc-biocgenerics
-
- dep: r-api-bioc-3.8 [sparc64]
- Paketet inte tillgängligt
-
- dep: r-base-core (>= 3.4.3-1) [m68k]
- GNU R core of statistical computation and graphics system
- dep: r-base-core (>= 3.5.2-1) [sparc64]
- dep: r-base-core (>= 4.2.2.20221110-2) [x32]
-
- dep: r-bioc-annotationdbi (>= 1.27.9) [hppa, ia64, m68k, sh4, sparc64, x32]
- GNU R Annotation Database Interface for BioConductor
- dep: r-bioc-annotationdbi (>= 1.66.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-biobase [hppa, ia64, m68k, sh4, sparc64, x32]
- base functions for Bioconductor
- dep: r-bioc-biobase (>= 2.64.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-biocgenerics (>= 0.15.3) [m68k, sparc64]
- generic functions for Bioconductor
- dep: r-bioc-biocgenerics (>= 0.37.0) [hppa, ia64, sh4, x32]
- dep: r-bioc-biocgenerics (>= 0.50.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-biostrings (>= 2.33.5) [m68k]
- GNU R string objects representing biological sequences
- dep: r-bioc-biostrings (>= 2.47.6) [sparc64]
- dep: r-bioc-biostrings (>= 2.57.2) [hppa, ia64, sh4, x32]
- dep: r-bioc-biostrings (>= 2.72.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-bsgenome (>= 1.37.6) [m68k]
- BioConductor infrastructure for Biostrings-based genome data packages
- dep: r-bioc-bsgenome (>= 1.47.3) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-bsgenome (>= 1.72.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-genomeinfodb (>= 1.11.4) [m68k]
- BioConductor utilities for manipulating chromosome identifiers
- dep: r-bioc-genomeinfodb (>= 1.15.2) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-genomeinfodb (>= 1.40.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-genomicfeatures (>= 1.27.4) [m68k]
- GNU R tools for making and manipulating transcript centric annotations
- dep: r-bioc-genomicfeatures (>= 1.31.3) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-genomicfeatures (>= 1.56.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-genomicranges (>= 1.27.6) [m68k]
- BioConductor representation and manipulation of genomic intervals
- dep: r-bioc-genomicranges (>= 1.31.8) [sparc64]
- dep: r-bioc-genomicranges (>= 1.41.5) [hppa, ia64, sh4, x32]
- dep: r-bioc-genomicranges (>= 1.56.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-iranges (>= 2.13.13) [sparc64]
- GNU R low-level containers for storing sets of integer ranges
- dep: r-bioc-iranges (>= 2.23.9) [hppa, ia64, sh4, x32]
- dep: r-bioc-iranges (>= 2.3.25) [m68k]
- dep: r-bioc-iranges (>= 2.38.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-matrixgenerics [hppa, ia64, sh4, x32]
- S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects
- dep: r-bioc-matrixgenerics (>= 1.16.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-rhtslib (>= 1.99.3) [hppa, ia64, sh4, x32]
- HTSlib high-throughput sequencing library as GNU R package
- dep: r-bioc-rhtslib (>= 3.0.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-rsamtools (>= 1.23.10) [m68k]
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
- dep: r-bioc-rsamtools (>= 1.33.6) [sparc64]
- dep: r-bioc-rsamtools (>= 1.99.0) [hppa, ia64, sh4, x32]
- dep: r-bioc-rsamtools (>= 2.20.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-rtracklayer (>= 1.25.16) [m68k]
- GNU R interface to genome browsers and their annotation tracks
- dep: r-bioc-rtracklayer (>= 1.39.7) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-rtracklayer (>= 1.64.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-s4vectors (>= 0.13.13) [m68k]
- BioConductor S4 implementation of vectors and lists
- dep: r-bioc-s4vectors (>= 0.17.24) [sparc64]
- dep: r-bioc-s4vectors (>= 0.27.12) [hppa, ia64, sh4, x32]
- dep: r-bioc-s4vectors (>= 0.42.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-summarizedexperiment (>= 1.19.5) [hppa, ia64, sh4, x32]
- BioConductor assay container
- dep: r-bioc-summarizedexperiment (>= 1.34.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
- dep: r-bioc-summarizedexperiment (>= 1.5.3) [m68k]
- dep: r-bioc-summarizedexperiment (>= 1.9.9) [sparc64]
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- dep: r-bioc-xvector (>= 0.19.7) [sparc64]
- BioConductor representation and manpulation of external sequences
- dep: r-bioc-xvector (>= 0.29.2) [hppa, ia64, sh4, x32]
- dep: r-bioc-xvector (>= 0.44.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
- dep: r-bioc-xvector (>= 0.5.6) [m68k]
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- dep: r-bioc-zlibbioc [hppa, ia64, sh4, sparc64, x32]
- (Virtual) zlibbioc Bioconductor package
- dep: r-bioc-zlibbioc (>= 1.50.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-cran-dbi
- GNU R package providing a generic database interface
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- dep: zlib1g (>= 1:1.2.3.3) [ej hppa, sh4, x32]
- Kompressionsbibliotek - körtidspaket
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- rec: r-bioc-snpstats
- BioConductor SnpMatrix and XSnpMatrix classes and methods
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- rec: r-cran-runit
- GNU R package providing unit testing framework
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- sug: r-bioc-annotationhub [hppa, ia64, m68k, sh4, sparc64, x32]
- GNU R client to access AnnotationHub resources
- sug: r-bioc-annotationhub (>= 3.12.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- sug: r-bioc-biocstyle [hppa, ia64, sh4, x32]
- standard styles for vignettes and other Bioconductor documents
- sug: r-bioc-biocstyle (>= 2.32.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- sug: r-bioc-snpstats [hppa, ia64, m68k, sh4, x32]
- BioConductor SnpMatrix and XSnpMatrix classes and methods
- sug: r-bioc-snpstats (>= 1.54.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- sug: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- sug: r-cran-httr [ej hppa, ia64, m68k, sh4, sparc64, x32]
- GNU R tools for working with URLs and HTTP
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- sug: r-cran-jsonlite [ej hppa, ia64, m68k, sh4, sparc64, x32]
- Robust, High Performance JSON Parser and Generator for R
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- sug: r-cran-knitr [ej m68k, sparc64, x32]
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-magick [ej hppa, ia64, m68k, sh4, sparc64, x32]
- advanced graphics and image-processing in GNU R
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- sug: r-cran-runit [ej sparc64]
- GNU R package providing unit testing framework
Hämta r-bioc-variantannotation
| Arkitektur | Version | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|---|
| alpha (inofficiell anpassning) | 1.50.0-1 | 3.432,7 kbyte | 6.905,0 kbyte | [filförteckning] |
| amd64 | 1.50.0-1 | 3.425,5 kbyte | 6.760,0 kbyte | [filförteckning] |
| arm64 | 1.50.0-1 | 3.408,1 kbyte | 6.776,0 kbyte | [filförteckning] |
| hppa (inofficiell anpassning) | 1.48.1-1 | 3.434,8 kbyte | 6.221,0 kbyte | [filförteckning] |
| ia64 (inofficiell anpassning) | 1.48.1-1+b1 | 3.527,1 kbyte | 6.992,0 kbyte | [filförteckning] |
| m68k (inofficiell anpassning) | 1.24.2-1 | 2.311,9 kbyte | 2.941,0 kbyte | [filförteckning] |
| mips64el | 1.50.0-1 | 3.398,1 kbyte | 6.878,0 kbyte | [filförteckning] |
| ppc64 (inofficiell anpassning) | 1.50.0-1 | 3.459,6 kbyte | 7.166,0 kbyte | [filförteckning] |
| ppc64el | 1.50.0-1 | 3.459,2 kbyte | 7.032,0 kbyte | [filförteckning] |
| riscv64 | 1.50.0-1 | 3.437,7 kbyte | 6.612,0 kbyte | [filförteckning] |
| s390x | 1.50.0-1 | 3.440,0 kbyte | 6.860,0 kbyte | [filförteckning] |
| sh4 (inofficiell anpassning) | 1.48.1-1 | 3.463,5 kbyte | 5.991,0 kbyte | [filförteckning] |
| sparc64 (inofficiell anpassning) | 1.28.10-1 | 2.919,0 kbyte | 4.040,0 kbyte | [filförteckning] |
| x32 (inofficiell anpassning) | 1.44.1-1 | 3.556,8 kbyte | 5.071,0 kbyte | [filförteckning] |