[ Källkod: r-bioc-rsamtools ]
Paket: r-bioc-rsamtools (2.20.0+dfsg-1 och andra)
Länkar för r-bioc-rsamtools
Debianresurser:
Hämta källkodspaketet r-bioc-rsamtools:
- [r-bioc-rsamtools_2.20.0+dfsg-1.dsc]
- [r-bioc-rsamtools_2.20.0+dfsg.orig.tar.xz]
- [r-bioc-rsamtools_2.20.0+dfsg-1.debian.tar.xz]
Ansvariga:
Externa resurser:
- Hemsida [bioconductor.org]
Liknande paket:
GNU R binary alignment (BAM), variant call (BCF), or tabix file import
This package provides an interface to the 'samtools', 'bcftools', and 'tabix' utilities for manipulating SAM (Sequence Alignment / Map), binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.
Andra paket besläktade med r-bioc-rsamtools
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-
- dep: libbz2-1.0 [ej hppa, m68k, sh4, sparc64, x32]
- high-quality block-sorting file compressor library - runtime
-
- dep: libc6 (>= 2.15) [m68k, sparc64]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
- dep: libc6 (>= 2.34) [ej alpha, ia64, m68k, sh4, sparc64]
- dep: libc6 (>= 2.37) [sh4]
-
- dep: libc6.1 (>= 2.34) [alpha]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
-
- dep: libcurl4 (>= 7.18.0) [hppa, ia64, sh4, x32]
- easy-to-use client-side URL transfer library (OpenSSL flavour)
-
- dep: libcurl4t64 (>= 7.18.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
- easy-to-use client-side URL transfer library (OpenSSL flavour)
-
- dep: libgcc-s1 (>= 3.0) [amd64, arm64, mips64el, ppc64, ppc64el, s390x, x32]
- GCC stödbibliotek
- dep: libgcc-s1 (>= 3.4) [alpha, riscv64]
- dep: libgcc-s1 (>= 4.2) [ia64, sh4]
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC stödbibliotek
-
- dep: libgcc1 (>= 1:3.4) [sparc64]
- Paketet inte tillgängligt
-
- dep: libgcc2 (>= 4.2.1) [m68k]
- Paketet inte tillgängligt
-
- dep: libgomp1 (>= 4.2.1) [m68k, sparc64]
- GCC OpenMP (GOMP) support library
-
- dep: liblzma5 (>= 5.1.1alpha+20120614) [ej hppa, m68k, sh4, sparc64, x32]
- XZ-format compression library
-
- dep: libstdc++6 (>= 11) [ej m68k, sparc64]
- GNU standardbibliotek v3 för C++
- dep: libstdc++6 (>= 5.2) [m68k, sparc64]
-
- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
-
- dep: r-api-3.4 [m68k]
- Paketet inte tillgängligt
-
- dep: r-api-3.5 [sparc64]
- Paketet inte tillgängligt
-
- dep: r-api-4.0 [ej m68k, sparc64]
- virtuellt paket som tillhandahålls av r-base-core
-
- dep: r-api-bioc-3.16 [x32]
- Paketet inte tillgängligt
-
- dep: r-api-bioc-3.18 [hppa, ia64, sh4]
- Paketet inte tillgängligt
-
- dep: r-api-bioc-3.19 [ej hppa, ia64, m68k, sh4, sparc64, x32]
- virtuellt paket som tillhandahålls av r-bioc-biocgenerics
-
- dep: r-api-bioc-3.8 [sparc64]
- Paketet inte tillgängligt
-
- dep: r-base-core (>= 3.4.2-2) [m68k]
- GNU R core of statistical computation and graphics system
- dep: r-base-core (>= 3.5.2-1) [sparc64]
- dep: r-base-core (>= 4.2.2.20221110-1) [x32]
-
- dep: r-bioc-biocgenerics (>= 0.1.3) [m68k]
- generic functions for Bioconductor
- dep: r-bioc-biocgenerics (>= 0.25.1) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-biocgenerics (>= 0.50.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-biocparallel [hppa, ia64, m68k, sh4, sparc64, x32]
- BioConductor facilities for parallel evaluation
- dep: r-bioc-biocparallel (>= 1.38.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-biostrings (>= 2.37.1) [m68k]
- GNU R string objects representing biological sequences
- dep: r-bioc-biostrings (>= 2.47.6) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-biostrings (>= 2.72.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-genomeinfodb (>= 1.1.3) [hppa, ia64, m68k, sh4, sparc64, x32]
- BioConductor utilities for manipulating chromosome identifiers
- dep: r-bioc-genomeinfodb (>= 1.40.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-genomicranges (>= 1.21.6) [m68k]
- BioConductor representation and manipulation of genomic intervals
- dep: r-bioc-genomicranges (>= 1.31.8) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-genomicranges (>= 1.56.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-iranges (>= 2.13.12) [hppa, ia64, sh4, sparc64, x32]
- GNU R low-level containers for storing sets of integer ranges
- dep: r-bioc-iranges (>= 2.3.7) [m68k]
- dep: r-bioc-iranges (>= 2.38.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-rhtslib (>= 1.99.3) [hppa, ia64, sh4, x32]
- HTSlib high-throughput sequencing library as GNU R package
- dep: r-bioc-rhtslib (>= 3.0.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- dep: r-bioc-s4vectors (>= 0.13.8) [m68k]
- BioConductor S4 implementation of vectors and lists
- dep: r-bioc-s4vectors (>= 0.17.25) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-s4vectors (>= 0.42.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-xvector (>= 0.15.1) [m68k]
- BioConductor representation and manpulation of external sequences
- dep: r-bioc-xvector (>= 0.19.7) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-xvector (>= 0.44.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-zlibbioc [hppa, ia64, sh4, sparc64, x32]
- (Virtual) zlibbioc Bioconductor package
- dep: r-bioc-zlibbioc (>= 1.50.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-cran-bitops
- GNU R package implementing bitwise operations
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- dep: zlib1g (>= 1:1.2.3.3) [ej hppa, sh4, x32]
- Kompressionsbibliotek - körtidspaket
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- rec: r-bioc-shortread
- GNU R classes and methods for high-throughput short-read sequencing data
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- rec: r-cran-runit
- GNU R package providing unit testing framework
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- sug: r-bioc-biocstyle [hppa, ia64, sh4, x32]
- standard styles for vignettes and other Bioconductor documents
- sug: r-bioc-biocstyle (>= 2.32.1) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- sug: r-bioc-genomicalignments [hppa, ia64, m68k, sh4, sparc64, x32]
- BioConductor representation and manipulation of short genomic alignments
- sug: r-bioc-genomicalignments (>= 1.40.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- sug: r-bioc-genomicfeatures [hppa, ia64, m68k, sh4, sparc64, x32]
- GNU R tools for making and manipulating transcript centric annotations
- sug: r-bioc-genomicfeatures (>= 1.56.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- sug: r-bioc-shortread (>= 1.19.10) [hppa, ia64, m68k, sh4, x32]
- GNU R classes and methods for high-throughput short-read sequencing data
- sug: r-bioc-shortread (>= 1.62.0) [ej hppa, ia64, m68k, sh4, sparc64, x32]
-
- sug: r-cran-knitr [ej m68k, sparc64, x32]
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-runit [ej sparc64]
- GNU R package providing unit testing framework
Hämta r-bioc-rsamtools
| Arkitektur | Version | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|---|
| alpha (inofficiell anpassning) | 2.20.0+dfsg-1 | 3.509,6 kbyte | 5.837,0 kbyte | [filförteckning] |
| amd64 | 2.20.0+dfsg-1 | 3.515,2 kbyte | 5.655,0 kbyte | [filförteckning] |
| arm64 | 2.20.0+dfsg-1 | 3.481,1 kbyte | 5.644,0 kbyte | [filförteckning] |
| hppa (inofficiell anpassning) | 2.18.0+dfsg-1 | 3.506,9 kbyte | 5.731,0 kbyte | [filförteckning] |
| ia64 (inofficiell anpassning) | 2.18.0+dfsg-1+b1 | 3.636,0 kbyte | 6.843,0 kbyte | [filförteckning] |
| m68k (inofficiell anpassning) | 1.30.0-1 | 3.206,0 kbyte | 5.170,0 kbyte | [filförteckning] |
| mips64el | 2.20.0+dfsg-1 | 3.470,0 kbyte | 5.831,0 kbyte | [filförteckning] |
| ppc64 (inofficiell anpassning) | 2.20.0+dfsg-1 | 3.554,1 kbyte | 6.231,0 kbyte | [filförteckning] |
| ppc64el | 2.20.0+dfsg-1 | 3.564,3 kbyte | 6.092,0 kbyte | [filförteckning] |
| riscv64 | 2.20.0+dfsg-1 | 3.527,0 kbyte | 5.435,0 kbyte | [filförteckning] |
| s390x | 2.20.0+dfsg-1 | 3.529,0 kbyte | 5.795,0 kbyte | [filförteckning] |
| sh4 (inofficiell anpassning) | 2.18.0+dfsg-1 | 3.552,9 kbyte | 5.453,0 kbyte | [filförteckning] |
| sparc64 (inofficiell anpassning) | 1.34.1-1 | 3.424,1 kbyte | 5.736,0 kbyte | [filförteckning] |
| x32 (inofficiell anpassning) | 2.14.0-1 | 3.666,4 kbyte | 5.700,0 kbyte | [filförteckning] |