Pakiet: r-bioc-variantannotation (1.50.0-1 i inne)

[ Pakiet źródłowy: r-bioc-variantannotation  ]

BioConductor annotation of genetic variants

This BioConductor package provides R functions to annotate variants, compute amino acid coding changess and to predict coding outcomes.

Inne pakiety związane z r-bioc-variantannotation

• dep: libbz2-1.0 [nie hppa, m68k, sh4, sparc64, x32]

  Wysokiej jakości biblioteka kompresji plików - wersja uruchomieniowa

• dep: libc6 (>= 2.15) [m68k, sparc64]

  Biblioteka GNU C: biblioteki współdzielone
  również pakiet wirtualny udostępniany przez libc6-udeb

  dep: libc6 (>= 2.34) [nie alpha, ia64, m68k, sh4, sparc64]

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  Biblioteka GNU C: biblioteki współdzielone
  również pakiet wirtualny udostępniany przez libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libcurl4 (>= 7.18.0) [hppa, ia64, sh4, x32]

  Łatwa w użyciu biblioteka klienta do transferu adresów URL (wersja OpenSSL)

• dep: libcurl4t64 (>= 7.18.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

  Łatwa w użyciu biblioteka klienta do transferu adresów URL (wersja OpenSSL)

• dep: liblzma5 (>= 5.1.1alpha+20120614) [nie hppa, m68k, sh4, sparc64, x32]

  Biblioteka do kompresji w formacie XZ

• dep: r-api-3.4 [m68k]

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• dep: r-api-3.5 [sparc64]

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• dep: r-api-4.0 [nie m68k, sparc64]

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• dep: r-api-bioc-3.16 [x32]

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• dep: r-api-bioc-3.18 [hppa, ia64, sh4]

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• dep: r-api-bioc-3.19 [nie hppa, ia64, m68k, sh4, sparc64, x32]

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• dep: r-api-bioc-3.8 [sparc64]

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• dep: r-base-core (>= 3.4.3-1) [m68k]

  GNU R core of statistical computation and graphics system

  dep: r-base-core (>= 3.5.2-1) [sparc64]

  dep: r-base-core (>= 4.2.2.20221110-2) [x32]

• dep: r-bioc-annotationdbi (>= 1.27.9) [hppa, ia64, m68k, sh4, sparc64, x32]

  GNU R Annotation Database Interface for BioConductor

  dep: r-bioc-annotationdbi (>= 1.66.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-biobase [hppa, ia64, m68k, sh4, sparc64, x32]

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  dep: r-bioc-biobase (>= 2.64.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-biocgenerics (>= 0.15.3) [m68k, sparc64]

  generic functions for Bioconductor

  dep: r-bioc-biocgenerics (>= 0.37.0) [hppa, ia64, sh4, x32]

  dep: r-bioc-biocgenerics (>= 0.50.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-biostrings (>= 2.33.5) [m68k]

  GNU R string objects representing biological sequences

  dep: r-bioc-biostrings (>= 2.47.6) [sparc64]

  dep: r-bioc-biostrings (>= 2.57.2) [hppa, ia64, sh4, x32]

  dep: r-bioc-biostrings (>= 2.72.1) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-bsgenome (>= 1.37.6) [m68k]

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  dep: r-bioc-bsgenome (>= 1.72.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-genomeinfodb (>= 1.11.4) [m68k]

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• dep: r-bioc-genomicfeatures (>= 1.27.4) [m68k]

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  dep: r-bioc-genomicfeatures (>= 1.31.3) [hppa, ia64, sh4, sparc64, x32]

  dep: r-bioc-genomicfeatures (>= 1.56.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-genomicranges (>= 1.27.6) [m68k]

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  dep: r-bioc-genomicranges (>= 1.31.8) [sparc64]

  dep: r-bioc-genomicranges (>= 1.41.5) [hppa, ia64, sh4, x32]

  dep: r-bioc-genomicranges (>= 1.56.1) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-iranges (>= 2.13.13) [sparc64]

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  dep: r-bioc-iranges (>= 2.23.9) [hppa, ia64, sh4, x32]

  dep: r-bioc-iranges (>= 2.3.25) [m68k]

  dep: r-bioc-iranges (>= 2.38.1) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-matrixgenerics [hppa, ia64, sh4, x32]

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

  dep: r-bioc-matrixgenerics (>= 1.16.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-rhtslib (>= 1.99.3) [hppa, ia64, sh4, x32]

  HTSlib high-throughput sequencing library as GNU R package

  dep: r-bioc-rhtslib (>= 3.0.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-rsamtools (>= 1.23.10) [m68k]

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

  dep: r-bioc-rsamtools (>= 1.33.6) [sparc64]

  dep: r-bioc-rsamtools (>= 1.99.0) [hppa, ia64, sh4, x32]

  dep: r-bioc-rsamtools (>= 2.20.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-rtracklayer (>= 1.25.16) [m68k]

  GNU R interface to genome browsers and their annotation tracks

  dep: r-bioc-rtracklayer (>= 1.39.7) [hppa, ia64, sh4, sparc64, x32]

  dep: r-bioc-rtracklayer (>= 1.64.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-s4vectors (>= 0.13.13) [m68k]

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  dep: r-bioc-summarizedexperiment (>= 1.9.9) [sparc64]

• dep: r-bioc-xvector (>= 0.19.7) [sparc64]

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  dep: r-bioc-xvector (>= 0.5.6) [m68k]

• dep: r-bioc-zlibbioc [hppa, ia64, sh4, sparc64, x32]

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  dep: r-bioc-zlibbioc (>= 1.50.0) [nie hppa, ia64, m68k, sh4, sparc64, x32]

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• sug: r-bioc-annotationhub [hppa, ia64, m68k, sh4, sparc64, x32]

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• sug: r-bioc-biocstyle [hppa, ia64, sh4, x32]

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• sug: r-bioc-snpstats [hppa, ia64, m68k, sh4, x32]

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• sug: r-cran-ggplot2

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• sug: r-cran-runit [nie sparc64]

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Pobieranie r-bioc-variantannotation

Pobierz dla wszystkich dostępnych architektur

Architektura	Wersja	Rozmiar pakietu	Rozmiar po instalacji	Pliki
alpha (port nieoficjalny)	1.50.0-1	3 432,7 KiB	6 905,0 KiB	[lista plików]
amd64	1.50.0-1	3 425,5 KiB	6 760,0 KiB	[lista plików]
arm64	1.50.0-1	3 408,1 KiB	6 776,0 KiB	[lista plików]
hppa (port nieoficjalny)	1.48.1-1	3 434,8 KiB	6 221,0 KiB	[lista plików]
ia64 (port nieoficjalny)	1.48.1-1+b1	3 527,1 KiB	6 992,0 KiB	[lista plików]
m68k (port nieoficjalny)	1.24.2-1	2 311,9 KiB	2 941,0 KiB	[lista plików]
mips64el	1.50.0-1	3 398,1 KiB	6 878,0 KiB	[lista plików]
ppc64 (port nieoficjalny)	1.50.0-1	3 459,6 KiB	7 166,0 KiB	[lista plików]
ppc64el	1.50.0-1	3 459,2 KiB	7 032,0 KiB	[lista plików]
riscv64	1.50.0-1	3 437,7 KiB	6 612,0 KiB	[lista plików]
s390x	1.50.0-1	3 440,0 KiB	6 860,0 KiB	[lista plików]
sh4 (port nieoficjalny)	1.48.1-1	3 463,5 KiB	5 991,0 KiB	[lista plików]
sparc64 (port nieoficjalny)	1.28.10-1	2 919,0 KiB	4 040,0 KiB	[lista plików]
x32 (port nieoficjalny)	1.44.1-1	3 556,8 KiB	5 071,0 KiB	[lista plików]