[ Source: ggd-utils ]
Package: ggd-utils (1.0.0+ds-1 and others)
Links for ggd-utils
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Download Source Package ggd-utils:
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External Resources:
- Homepage [github.com]
Similar packages:
programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:
* a .tbi is present
* the VCF has ""##fileformat=VCF" as the first
line
* the VCF has a #CHROM header
* the chromosome are in the order specified by
the genome file (and present)
* the positions are sorted
* the positions are <= the chromosome lengths
defined in the genome file.
As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes
Other Packages Related to ggd-utils
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- dep: libc6 (>= 2.34)
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb
Download ggd-utils
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| amd64 | 1.0.0+ds-1+b12 | 2,113.8 kB | 6,191.0 kB | [list of files] |
| arm64 | 1.0.0+ds-1+b12 | 1,826.3 kB | 5,884.0 kB | [list of files] |
| armel | 1.0.0+ds-1+b12 | 1,798.6 kB | 6,035.0 kB | [list of files] |
| armhf | 1.0.0+ds-1+b12 | 1,792.8 kB | 6,035.0 kB | [list of files] |
| i386 | 1.0.0+ds-1+b12 | 1,953.0 kB | 5,991.0 kB | [list of files] |
| mips64el | 1.0.0+ds-1+b12 | 1,635.5 kB | 6,734.0 kB | [list of files] |
| ppc64el | 1.0.0+ds-1+b12 | 1,813.2 kB | 6,074.0 kB | [list of files] |
| riscv64 | 1.0.0+ds-1+b7 | 1,791.5 kB | 5,819.0 kB | [list of files] |
| s390x | 1.0.0+ds-1+b12 | 1,922.3 kB | 6,523.0 kB | [list of files] |