[ Source: lagan ]
Package: lagan (2.0-10)
Links for lagan
Debian Resources:
Download Source Package lagan:
Maintainers:
External Resources:
- Homepage [lagan.stanford.edu]
Similar packages:
highly parametrizable pairwise global genome sequence aligner
Lagan takes local alignments generated by CHAOS as anchors, and limits the search area of the Needleman-Wunsch algorithm around these anchors.
Multi-LAGAN is a generalization of the pairwise algorithm to multiple sequence alignment. M-LAGAN performs progressive pairwise alignments, guided by a user-specified phylogenetic tree. Alignments are aligned to other alignments using the sum-of-pairs metric.
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- dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [ia64]
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- dep: libgcc-s4 (>= 4.1.1) [hppa]
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Download lagan
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| alpha (unofficial port) | 178.8 kB | 1,898.0 kB | [list of files] |
| amd64 | 179.9 kB | 834.0 kB | [list of files] |
| arm64 | 170.4 kB | 1,770.0 kB | [list of files] |
| armel | 163.2 kB | 691.0 kB | [list of files] |
| armhf | 162.4 kB | 583.0 kB | [list of files] |
| hppa (unofficial port) | 174.6 kB | 716.0 kB | [list of files] |
| i386 | 186.7 kB | 831.0 kB | [list of files] |
| ia64 (unofficial port) | 213.5 kB | 1,035.0 kB | [list of files] |
| m68k (unofficial port) | 155.6 kB | 683.0 kB | [list of files] |
| mips64el | 182.3 kB | 1,924.0 kB | [list of files] |
| ppc64 (unofficial port) | 190.5 kB | 2,034.0 kB | [list of files] |
| ppc64el | 199.0 kB | 1,898.0 kB | [list of files] |
| riscv64 | 180.8 kB | 682.0 kB | [list of files] |
| s390x | 186.6 kB | 802.0 kB | [list of files] |
| sh4 (unofficial port) | 179.3 kB | 1,747.0 kB | [list of files] |
| sparc64 (unofficial port) | 166.3 kB | 23,868.0 kB | [list of files] |
| x32 (unofficial port) | 174.9 kB | 796.0 kB | [list of files] |