套件：megadepth（1.2.0-4）

[ 原始碼： megadepth  ]

computes coverage from BigWig and BAM sequencing files

A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.

This package is a successor of the program 'bamcount'.

其他與 megadepth 有關的套件

• dep: libbigwig0 (>= 0.4.6+dfsg)

  C library for handling bigWig files

• dep: libc6 (>= 2.14) [amd64]

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [除 amd64, arm64, ppc64el]

• dep: libgcc-s1 (>= 3.0) [除 armel, armhf, i386, mipsel]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386, mipsel]

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• sug: r-bioc-megadepth

  BioCOnductor BigWig and BAM related utilities

下載 megadepth

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
amd64	78。3 kB	266。0 kB	[檔案列表]
arm64	68。9 kB	274。0 kB	[檔案列表]
armel	68。7 kB	273。0 kB	[檔案列表]
armhf	69。1 kB	209。0 kB	[檔案列表]
i386	81。1 kB	273。0 kB	[檔案列表]
mips64el	68。8 kB	281。0 kB	[檔案列表]
mipsel	70。7 kB	279。0 kB	[檔案列表]
ppc64el	81。5 kB	338。0 kB	[檔案列表]
s390x	70。2 kB	262。0 kB	[檔案列表]