软件包：r-bioc-rsamtools（2.20.0+dfsg-1 以及其他的）

[ 源代码： r-bioc-rsamtools  ]

GNU R binary alignment (BAM), variant call (BCF), or tabix file import

This package provides an interface to the 'samtools', 'bcftools', and 'tabix' utilities for manipulating SAM (Sequence Alignment / Map), binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.

其他与 r-bioc-rsamtools 有关的软件包

• dep: libbz2-1.0 [除 hppa, m68k, sh4, sparc64, x32]

  高品质块排序文件压缩程序库 - 运行时库

• dep: libc6 (>= 2.15) [m68k, sparc64]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

  dep: libc6 (>= 2.34) [除 alpha, ia64, m68k, sh4, sparc64]

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libcurl4 (>= 7.18.0) [hppa, ia64, sh4, x32]

  简单易用的客户端 URL 传输软件库（OpenSSL 变种）

• dep: libcurl4t64 (>= 7.18.0) [除 hppa, ia64, m68k, sh4, sparc64, x32]

  简单易用的客户端 URL 传输软件库（OpenSSL 变种）

• dep: libgcc-s1 (>= 3.0) [amd64, arm64, mips64el, ppc64, ppc64el, s390x, x32]

  GCC 支持库

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64]

  dep: libgcc-s1 (>= 4.2) [ia64, sh4]

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC 支持库

• dep: libgcc1 (>= 1:3.4) [sparc64]

  软件包暂时不可用

• dep: libgcc2 (>= 4.2.1) [m68k]

  软件包暂时不可用

• dep: libgomp1 (>= 4.2.1) [m68k, sparc64]

  GCC OpenMP（GOMP）支持库

• dep: liblzma5 (>= 5.1.1alpha+20120614) [除 hppa, m68k, sh4, sparc64, x32]

  XZ 格式压缩库

• dep: libstdc++6 (>= 11) [除 m68k, sparc64]

  GNU 标准 C++ 库，第3版

  dep: libstdc++6 (>= 5.2) [m68k, sparc64]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: r-api-3.4 [m68k]

  软件包暂时不可用

• dep: r-api-3.5 [sparc64]

  软件包暂时不可用

• dep: r-api-4.0 [除 m68k, sparc64]

  本虚包由这些包填实： r-base-core

• dep: r-api-bioc-3.16 [x32]

  软件包暂时不可用

• dep: r-api-bioc-3.18 [hppa, ia64, sh4]

  软件包暂时不可用

• dep: r-api-bioc-3.19 [除 hppa, ia64, m68k, sh4, sparc64, x32]

  本虚包由这些包填实： r-bioc-biocgenerics

• dep: r-api-bioc-3.8 [sparc64]

  软件包暂时不可用

• dep: r-base-core (>= 3.4.2-2) [m68k]

  GNU R core of statistical computation and graphics system

  dep: r-base-core (>= 3.5.2-1) [sparc64]

  dep: r-base-core (>= 4.2.2.20221110-1) [x32]

• dep: r-bioc-biocgenerics (>= 0.1.3) [m68k]

  generic functions for Bioconductor

  dep: r-bioc-biocgenerics (>= 0.25.1) [hppa, ia64, sh4, sparc64, x32]

  dep: r-bioc-biocgenerics (>= 0.50.0) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-biocparallel [hppa, ia64, m68k, sh4, sparc64, x32]

  BioConductor facilities for parallel evaluation

  dep: r-bioc-biocparallel (>= 1.38.0) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-biostrings (>= 2.37.1) [m68k]

  GNU R string objects representing biological sequences

  dep: r-bioc-biostrings (>= 2.47.6) [hppa, ia64, sh4, sparc64, x32]

  dep: r-bioc-biostrings (>= 2.72.1) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-genomeinfodb (>= 1.1.3) [hppa, ia64, m68k, sh4, sparc64, x32]

  BioConductor utilities for manipulating chromosome identifiers

  dep: r-bioc-genomeinfodb (>= 1.40.1) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-genomicranges (>= 1.21.6) [m68k]

  BioConductor representation and manipulation of genomic intervals

  dep: r-bioc-genomicranges (>= 1.31.8) [hppa, ia64, sh4, sparc64, x32]

  dep: r-bioc-genomicranges (>= 1.56.1) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-iranges (>= 2.13.12) [hppa, ia64, sh4, sparc64, x32]

  GNU R low-level containers for storing sets of integer ranges

  dep: r-bioc-iranges (>= 2.3.7) [m68k]

  dep: r-bioc-iranges (>= 2.38.1) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-rhtslib (>= 1.99.3) [hppa, ia64, sh4, x32]

  HTSlib high-throughput sequencing library as GNU R package

  dep: r-bioc-rhtslib (>= 3.0.0) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-s4vectors (>= 0.13.8) [m68k]

  BioConductor S4 implementation of vectors and lists

  dep: r-bioc-s4vectors (>= 0.17.25) [hppa, ia64, sh4, sparc64, x32]

  dep: r-bioc-s4vectors (>= 0.42.1) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-xvector (>= 0.15.1) [m68k]

  BioConductor representation and manpulation of external sequences

  dep: r-bioc-xvector (>= 0.19.7) [hppa, ia64, sh4, sparc64, x32]

  dep: r-bioc-xvector (>= 0.44.0) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-bioc-zlibbioc [hppa, ia64, sh4, sparc64, x32]

  (Virtual) zlibbioc Bioconductor package

  dep: r-bioc-zlibbioc (>= 1.50.0) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• dep: r-cran-bitops

  GNU R package implementing bitwise operations

• dep: zlib1g (>= 1:1.2.3.3) [除 hppa, sh4, x32]

  压缩库 - 运行时

• rec: r-bioc-shortread

  GNU R classes and methods for high-throughput short-read sequencing data

• rec: r-cran-runit

  GNU R package providing unit testing framework

• sug: r-bioc-biocstyle [hppa, ia64, sh4, x32]

  standard styles for vignettes and other Bioconductor documents

  sug: r-bioc-biocstyle (>= 2.32.1) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• sug: r-bioc-genomicalignments [hppa, ia64, m68k, sh4, sparc64, x32]

  BioConductor representation and manipulation of short genomic alignments

  sug: r-bioc-genomicalignments (>= 1.40.0) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• sug: r-bioc-genomicfeatures [hppa, ia64, m68k, sh4, sparc64, x32]

  GNU R tools for making and manipulating transcript centric annotations

  sug: r-bioc-genomicfeatures (>= 1.56.0) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• sug: r-bioc-shortread (>= 1.19.10) [hppa, ia64, m68k, sh4, x32]

  GNU R classes and methods for high-throughput short-read sequencing data

  sug: r-bioc-shortread (>= 1.62.0) [除 hppa, ia64, m68k, sh4, sparc64, x32]

• sug: r-cran-knitr [除 m68k, sparc64, x32]

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-runit [除 sparc64]

  GNU R package providing unit testing framework

下载 r-bioc-rsamtools

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
alpha （非官方移植版）	2.20.0+dfsg-1	3,509.6 kB	5,837.0 kB	[文件列表]
amd64	2.20.0+dfsg-1	3,515.2 kB	5,655.0 kB	[文件列表]
arm64	2.20.0+dfsg-1	3,481.1 kB	5,644.0 kB	[文件列表]
hppa （非官方移植版）	2.18.0+dfsg-1	3,506.9 kB	5,731.0 kB	[文件列表]
ia64 （非官方移植版）	2.18.0+dfsg-1+b1	3,636.0 kB	6,843.0 kB	[文件列表]
m68k （非官方移植版）	1.30.0-1	3,206.0 kB	5,170.0 kB	[文件列表]
mips64el	2.20.0+dfsg-1	3,470.0 kB	5,831.0 kB	[文件列表]
ppc64 （非官方移植版）	2.20.0+dfsg-1	3,554.1 kB	6,231.0 kB	[文件列表]
ppc64el	2.20.0+dfsg-1	3,564.3 kB	6,092.0 kB	[文件列表]
riscv64	2.20.0+dfsg-1	3,527.0 kB	5,435.0 kB	[文件列表]
s390x	2.20.0+dfsg-1	3,529.0 kB	5,795.0 kB	[文件列表]
sh4 （非官方移植版）	2.18.0+dfsg-1	3,552.9 kB	5,453.0 kB	[文件列表]
sparc64 （非官方移植版）	1.34.1-1	3,424.1 kB	5,736.0 kB	[文件列表]
x32 （非官方移植版）	2.14.0-1	3,666.4 kB	5,700.0 kB	[文件列表]