[ 源代码: miniasm ]
软件包:miniasm(0.3+dfsg-4 以及其他的)
ultrafast de novo assembler for long noisy DNA sequencing reads
Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.
其他与 miniasm 有关的软件包
|
|
|
|
-
- dep: libc6 (>= 2.34) [除 alpha, ia64, sh4]
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6-udeb
- dep: libc6 (>= 2.35) [sh4]
-
- dep: libc6.1 (>= 2.27) [alpha]
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6.1-udeb
- dep: libc6.1 (>= 2.35) [ia64]
-
- dep: zlib1g (>= 1:1.1.4)
- 压缩库 - 运行时
-
- rec: minimap
- tool for approximate mapping of long biosequences such as DNA reads
下载 miniasm
硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
---|---|---|---|---|
alpha (非官方移植版) | 0.3+dfsg-4 | 31.2 kB | 83.0 kB | [文件列表] |
amd64 | 0.3+dfsg-4 | 29.2 kB | 71.0 kB | [文件列表] |
arm64 | 0.3+dfsg-4+b1 | 27.2 kB | 84.0 kB | [文件列表] |
armel | 0.3+dfsg-4 | 27.7 kB | 82.0 kB | [文件列表] |
armhf | 0.3+dfsg-4 | 26.3 kB | 82.0 kB | [文件列表] |
hppa (非官方移植版) | 0.3+dfsg-4 | 29.3 kB | 67.0 kB | [文件列表] |
i386 | 0.3+dfsg-4 | 31.2 kB | 78.0 kB | [文件列表] |
ia64 (非官方移植版) | 0.3+dfsg-4 | 38.2 kB | 113.0 kB | [文件列表] |
m68k (非官方移植版) | 0.3+dfsg-4 | 25.9 kB | 66.0 kB | [文件列表] |
mips64el | 0.3+dfsg-4 | 29.7 kB | 86.0 kB | [文件列表] |
ppc64 (非官方移植版) | 0.3+dfsg-4 | 32.3 kB | 147.0 kB | [文件列表] |
ppc64el | 0.3+dfsg-4 | 31.9 kB | 83.0 kB | [文件列表] |
riscv64 | 0.3+dfsg-4+b1 | 29.9 kB | 60.0 kB | [文件列表] |
s390x | 0.3+dfsg-4 | 28.4 kB | 70.0 kB | [文件列表] |
sh4 (非官方移植版) | 0.3+dfsg-4 | 29.0 kB | 82.0 kB | [文件列表] |
sparc64 (非官方移植版) | 0.3+dfsg-4 | 26.4 kB | 1,044.0 kB | [文件列表] |
x32 (非官方移植版) | 0.3+dfsg-4 | 29.0 kB | 70.0 kB | [文件列表] |