Package: miniasm (0.3+dfsg-4 and others)
Links for miniasm
Debian Resources:
Download Source Package miniasm:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
ultrafast de novo assembler for long noisy DNA sequencing reads
Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.
Other Packages Related to miniasm
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- dep: libc6 (>= 2.34) [not alpha, ia64, sh4]
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.35) [sh4]
-
- dep: libc6.1 (>= 2.27) [alpha]
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6.1-udeb
- dep: libc6.1 (>= 2.35) [ia64]
-
- dep: zlib1g (>= 1:1.1.4)
- tömörítő könyvtár - futásidejű
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- rec: minimap
- tool for approximate mapping of long biosequences such as DNA reads
Download miniasm
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
alpha (unofficial port) | 0.3+dfsg-4 | 31.2 kB | 83.0 kB | [list of files] |
amd64 | 0.3+dfsg-4 | 29.2 kB | 71.0 kB | [list of files] |
arm64 | 0.3+dfsg-4+b1 | 27.2 kB | 84.0 kB | [list of files] |
armel | 0.3+dfsg-4 | 27.7 kB | 82.0 kB | [list of files] |
armhf | 0.3+dfsg-4 | 26.3 kB | 82.0 kB | [list of files] |
hppa (unofficial port) | 0.3+dfsg-4 | 29.3 kB | 67.0 kB | [list of files] |
i386 | 0.3+dfsg-4 | 31.2 kB | 78.0 kB | [list of files] |
ia64 (unofficial port) | 0.3+dfsg-4 | 38.2 kB | 113.0 kB | [list of files] |
m68k (unofficial port) | 0.3+dfsg-4 | 25.9 kB | 66.0 kB | [list of files] |
mips64el | 0.3+dfsg-4 | 29.7 kB | 86.0 kB | [list of files] |
ppc64 (unofficial port) | 0.3+dfsg-4 | 32.3 kB | 147.0 kB | [list of files] |
ppc64el | 0.3+dfsg-4 | 31.9 kB | 83.0 kB | [list of files] |
riscv64 | 0.3+dfsg-4+b1 | 29.9 kB | 60.0 kB | [list of files] |
s390x | 0.3+dfsg-4 | 28.4 kB | 70.0 kB | [list of files] |
sh4 (unofficial port) | 0.3+dfsg-4 | 29.0 kB | 82.0 kB | [list of files] |
sparc64 (unofficial port) | 0.3+dfsg-4 | 26.4 kB | 1,044.0 kB | [list of files] |
x32 (unofficial port) | 0.3+dfsg-4 | 29.0 kB | 70.0 kB | [list of files] |