软件包：miniasm（0.3+dfsg-4 以及其他的）

[ 源代码： miniasm  ]

ultrafast de novo assembler for long noisy DNA sequencing reads

Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.

标签: 生物学: 核酸, 领域: 生物学, field::biology:bioinformatics, implemented-in::c, 用户接口: 命令行, 角色: role::program, science::calculation, Purpose: 分布式计算, use::comparing, works-with::biological-sequence

其他与 miniasm 有关的软件包

• dep: libc6 (>= 2.34)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: zlib1g (>= 1:1.1.4)

  压缩库 - 运行时

• rec: minimap

  tool for approximate mapping of long biosequences such as DNA reads

下载 miniasm

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
amd64	0.3+dfsg-4	29.2 kB	71.0 kB	[文件列表]
arm64	0.3+dfsg-4+b1	27.2 kB	84.0 kB	[文件列表]
armel	0.3+dfsg-4	27.7 kB	82.0 kB	[文件列表]
armhf	0.3+dfsg-4	26.3 kB	82.0 kB	[文件列表]
i386	0.3+dfsg-4	31.2 kB	78.0 kB	[文件列表]
mips64el	0.3+dfsg-4	29.7 kB	86.0 kB	[文件列表]
ppc64el	0.3+dfsg-4	31.9 kB	83.0 kB	[文件列表]
riscv64	0.3+dfsg-4+b1	29.9 kB	60.0 kB	[文件列表]
s390x	0.3+dfsg-4	28.4 kB	70.0 kB	[文件列表]