Paket: gmap (2024-08-20+ds-1)
Länkar för gmap
Debianresurser:
Hämta källkodspaketet gmap:
Ansvariga:
- Debian Med Packaging Team (QA-sida, E-postarkiv)
- Shaun Jackman (QA-sida)
- Andreas Tille (QA-sida)
- Alexandre Mestiashvili (QA-sida)
- Étienne Mollier (QA-sida)
Externa resurser:
- Hemsida [research-pub.gene.com]
Liknande paket:
spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as utilities to manage genome databases in GMAP/GSNAP format. GMAP (Genomic Mapping and Alignment Program) is a tool for aligning EST, mRNA and cDNA sequences. GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for aligning single-end and paired-end transcriptome reads. Both tools can use a database of
* known splice sites and identify novel splice sites. * known single-nucleotide polymorphisms (SNPs).GSNAP can align bisulfite-treated DNA.
Andra paket besläktade med gmap
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- dep: libc6 (>= 2.34)
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- dep: perl
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Hämta gmap
Arkitektur | Paketstorlek | Installerad storlek | Filer |
---|---|---|---|
amd64 | 33.868,9 kbyte | 268.618,0 kbyte | [filförteckning] |
arm64 | 6.876,8 kbyte | 61.194,0 kbyte | [filförteckning] |
armel | 4.856,2 kbyte | 46.203,0 kbyte | [filförteckning] |
armhf | 4.954,0 kbyte | 44.079,0 kbyte | [filförteckning] |
i386 | 5.202,6 kbyte | 46.551,0 kbyte | [filförteckning] |
mips64el | 5.881,3 kbyte | 57.807,0 kbyte | [filförteckning] |
ppc64el | 7.086,6 kbyte | 63.626,0 kbyte | [filförteckning] |
riscv64 | 6.341,5 kbyte | 59.286,0 kbyte | [filförteckning] |