[ Source: gmap ]
Package: gmap (2024-08-20+ds-1)
Links for gmap
Debian Resources:
Download Source Package gmap:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Shaun Jackman (QA Page)
- Andreas Tille (QA Page)
- Alexandre Mestiashvili (QA Page)
- Étienne Mollier (QA Page)
External Resources:
- Homepage [research-pub.gene.com]
Similar packages:
spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as utilities to manage genome databases in GMAP/GSNAP format. GMAP (Genomic Mapping and Alignment Program) is a tool for aligning EST, mRNA and cDNA sequences. GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for aligning single-end and paired-end transcriptome reads. Both tools can use a database of
* known splice sites and identify novel splice sites. * known single-nucleotide polymorphisms (SNPs).GSNAP can align bisulfite-treated DNA.
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Download gmap
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 33,868.9 kB | 268,618.0 kB | [list of files] |
| arm64 | 6,876.8 kB | 61,194.0 kB | [list of files] |
| armel | 4,856.2 kB | 46,203.0 kB | [list of files] |
| armhf | 4,954.0 kB | 44,079.0 kB | [list of files] |
| i386 | 5,202.6 kB | 46,551.0 kB | [list of files] |
| mips64el | 5,881.3 kB | 57,807.0 kB | [list of files] |
| ppc64el | 7,086.6 kB | 63,626.0 kB | [list of files] |
| riscv64 | 6,341.5 kB | 59,286.0 kB | [list of files] |