[ Источник: r-bioc-shortread ]
Пакет: r-bioc-shortread (1.62.0-1 и другие)
Ссылки для r-bioc-shortread
Ресурсы Debian:
- Сообщения об ошибках
- Developer Information
- Debian журнал изменений
- Файл авторских прав
- Отслеживание заплат Debian
Исходный код r-bioc-shortread:
- [r-bioc-shortread_1.62.0-1.dsc]
- [r-bioc-shortread_1.62.0.orig.tar.gz]
- [r-bioc-shortread_1.62.0-1.debian.tar.xz]
Сопровождающие:
Внешние ресурсы:
- Сайт [bioconductor.org]
Подобные пакеты:
GNU R classes and methods for high-throughput short-read sequencing data
This BioConductor module is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources.
Другие пакеты, относящиеся к r-bioc-shortread
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- dep: libc6 (>= 2.14) [amd64]
- библиотека GNU C: динамически подключаемые библиотеки
также виртуальный пакет, предоставляемый libc6-udeb
- dep: libc6 (>= 2.16) [x32]
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.27) [riscv64]
- dep: libc6 (>= 2.37) [sh4]
- dep: libc6 (>= 2.7) [hppa, m68k, mips64el, ppc64, s390x, sparc64]
-
- dep: libc6.1 (>= 2.37) [ia64]
- библиотека GNU C: динамически подключаемые библиотеки
также виртуальный пакет, предоставляемый libc6.1-udeb
- dep: libc6.1 (>= 2.7) [alpha]
-
- dep: libgcc-s1 (>= 3.0) [не hppa, ia64, m68k, sparc64]
- вспомогательная библиотека GCC
- dep: libgcc-s1 (>= 4.2) [ia64]
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- вспомогательная библиотека GCC
-
- dep: libgcc1 (>= 1:3.0) [sparc64]
- Пакет недоступен
-
- dep: libgcc2 (>= 4.2.1) [m68k]
- Пакет недоступен
-
- dep: libgomp1 (>= 4.2.1) [m68k, sparc64]
- вспомогательная библиотека GCC OpenMP (GOMP)
-
- dep: libstdc++6 (>= 11) [не m68k, sparc64]
- стандартная библиотека GNU C++ версии 3
- dep: libstdc++6 (>= 5.2) [m68k, sparc64]
-
- dep: libunwind8 [ia64]
- библиотека для выявления цепочки вызовов функций в программе
-
- dep: r-api-3.4 [m68k]
- Пакет недоступен
-
- dep: r-api-3.5 [sparc64]
- Пакет недоступен
-
- dep: r-api-4.0 [не m68k, sparc64]
- виртуальный пакет, предоставляемый r-base-core
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- dep: r-api-bioc-3.16 [x32]
- Пакет недоступен
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- dep: r-api-bioc-3.18 [hppa, ia64, sh4]
- Пакет недоступен
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- dep: r-api-bioc-3.19 [не hppa, ia64, m68k, sh4, sparc64, x32]
- виртуальный пакет, предоставляемый r-bioc-biocgenerics
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- dep: r-api-bioc-3.8 [sparc64]
- Пакет недоступен
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- dep: r-base-core (>= 3.4.3-1) [m68k]
- GNU R core of statistical computation and graphics system
- dep: r-base-core (>= 3.5.2-1) [sparc64]
- dep: r-base-core (>= 4.2.2.20221110-1) [x32]
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- dep: r-bioc-biobase [hppa, ia64, m68k, sh4, sparc64, x32]
- base functions for Bioconductor
- dep: r-bioc-biobase (>= 2.64.0) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-biocgenerics (>= 0.23.3) [hppa, ia64, m68k, sh4, sparc64, x32]
- generic functions for Bioconductor
- dep: r-bioc-biocgenerics (>= 0.50.0) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-biocparallel [hppa, ia64, m68k, sh4, sparc64, x32]
- BioConductor facilities for parallel evaluation
- dep: r-bioc-biocparallel (>= 1.38.0) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-biostrings (>= 2.37.1) [m68k]
- GNU R string objects representing biological sequences
- dep: r-bioc-biostrings (>= 2.47.6) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-biostrings (>= 2.72.1) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-genomeinfodb (>= 1.1.19) [m68k]
- BioConductor utilities for manipulating chromosome identifiers
- dep: r-bioc-genomeinfodb (>= 1.15.2) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-genomeinfodb (>= 1.40.1) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-genomicalignments (>= 1.15.6) [hppa, ia64, sh4, sparc64, x32]
- BioConductor representation and manipulation of short genomic alignments
- dep: r-bioc-genomicalignments (>= 1.40.0) [не hppa, ia64, m68k, sh4, sparc64, x32]
- dep: r-bioc-genomicalignments (>= 1.5.4) [m68k]
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- dep: r-bioc-genomicranges (>= 1.21.6) [m68k]
- BioConductor representation and manipulation of genomic intervals
- dep: r-bioc-genomicranges (>= 1.31.8) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-genomicranges (>= 1.56.1) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-iranges (>= 2.13.12) [hppa, ia64, sh4, sparc64, x32]
- GNU R low-level containers for storing sets of integer ranges
- dep: r-bioc-iranges (>= 2.3.7) [m68k]
- dep: r-bioc-iranges (>= 2.38.1) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-pwalign (>= 1.0.0-2~0exp1) [не hppa, ia64, m68k, sh4, sparc64, x32]
- Perform pairwise sequence alignments
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- dep: r-bioc-rhtslib [hppa, ia64, sh4, x32]
- HTSlib high-throughput sequencing library as GNU R package
- dep: r-bioc-rhtslib (>= 3.0.0) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-rsamtools (>= 1.21.4) [m68k]
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
- dep: r-bioc-rsamtools (>= 1.31.2) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-rsamtools (>= 2.20.0) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-s4vectors (>= 0.13.8) [m68k]
- BioConductor S4 implementation of vectors and lists
- dep: r-bioc-s4vectors (>= 0.17.25) [hppa, ia64, sh4, sparc64, x32]
- dep: r-bioc-s4vectors (>= 0.42.1) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-xvector [hppa, ia64, sh4, x32]
- BioConductor representation and manpulation of external sequences
- dep: r-bioc-xvector (>= 0.44.0) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-bioc-zlibbioc [hppa, ia64, sh4, x32]
- (Virtual) zlibbioc Bioconductor package
- dep: r-bioc-zlibbioc (>= 1.50.0) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- dep: r-cran-hwriter
- HTML Writer - Outputs R objects in HTML format
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- dep: r-cran-lattice
- GNU R package for 'Trellis' graphics
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- dep: r-cran-latticeextra
- GNU R package of additional graphical displays based on lattice
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- dep: zlib1g (>= 1:1.1.4)
- библиотека сжатия
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- rec: r-cran-runit
- GNU R package providing unit testing framework
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- sug: r-bioc-biocstyle [hppa, ia64, sh4, x32]
- standard styles for vignettes and other Bioconductor documents
- sug: r-bioc-biocstyle (>= 2.32.1) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- sug: r-bioc-biomart [hppa, ia64, m68k, sh4, sparc64, x32]
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
- sug: r-bioc-biomart (>= 2.60.1) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- sug: r-bioc-genomicfeatures [hppa, ia64, m68k, sh4, sparc64, x32]
- GNU R tools for making and manipulating transcript centric annotations
- sug: r-bioc-genomicfeatures (>= 1.56.0) [не hppa, ia64, m68k, sh4, sparc64, x32]
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- sug: r-cran-knitr [не hppa, ia64, m68k, sh4, sparc64, x32]
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-runit [не sparc64]
- GNU R package providing unit testing framework
Загрузка r-bioc-shortread
| Архитектура | Версия | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|---|
| alpha (неофициальный перенос) | 1.62.0-1 | 5 095,0 Кб | 8 253,0 Кб | [список файлов] |
| amd64 | 1.62.0-1 | 5 095,4 Кб | 8 206,0 Кб | [список файлов] |
| arm64 | 1.62.0-1 | 5 091,8 Кб | 8 252,0 Кб | [список файлов] |
| hppa (неофициальный перенос) | 1.60.0-2 | 5 064,8 Кб | 7 527,0 Кб | [список файлов] |
| ia64 (неофициальный перенос) | 1.60.0-2 | 5 072,7 Кб | 7 620,0 Кб | [список файлов] |
| m68k (неофициальный перенос) | 1.36.0-1 | 4 189,1 Кб | 6 069,0 Кб | [список файлов] |
| mips64el | 1.62.0-1 | 5 088,5 Кб | 8 266,0 Кб | [список файлов] |
| ppc64 (неофициальный перенос) | 1.62.0-1 | 5 099,6 Кб | 8 320,0 Кб | [список файлов] |
| ppc64el | 1.62.0-1 | 5 097,7 Кб | 8 316,0 Кб | [список файлов] |
| riscv64 | 1.62.0-1 | 5 094,1 Кб | 8 186,0 Кб | [список файлов] |
| s390x | 1.62.0-1 | 5 094,2 Кб | 8 216,0 Кб | [список файлов] |
| sh4 (неофициальный перенос) | 1.60.0-2 | 5 066,6 Кб | 7 494,0 Кб | [список файлов] |
| sparc64 (неофициальный перенос) | 1.40.0-1 | 4 896,8 Кб | 7 343,0 Кб | [список файлов] |
| x32 (неофициальный перенос) | 1.56.1-1 | 5 043,0 Кб | 7 479,0 Кб | [список файлов] |