[ Источник: r-bioc-genomicranges ]
Пакет: r-bioc-genomicranges (1.56.1+dfsg-1 и другие)
Ссылки для r-bioc-genomicranges
Ресурсы Debian:
- Сообщения об ошибках
- Developer Information
- Debian журнал изменений
- Файл авторских прав
- Отслеживание заплат Debian
Исходный код r-bioc-genomicranges:
- [r-bioc-genomicranges_1.56.1+dfsg-1.dsc]
- [r-bioc-genomicranges_1.56.1+dfsg.orig.tar.xz]
- [r-bioc-genomicranges_1.56.1+dfsg-1.debian.tar.xz]
Сопровождающие:
Внешние ресурсы:
- Сайт [bioconductor.org]
Подобные пакеты:
BioConductor representation and manipulation of genomic intervals
The ability to efficiently store genomic annotations and alignments is playing a central role when it comes to analyze high-throughput sequencing data (a.k.a. NGS data). The package defines general purpose containers for storing genomic intervals as well as more specialized containers for storing alignments against a reference genome.
Другие пакеты, относящиеся к r-bioc-genomicranges
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- dep: libc6 (>= 2.16) [x32]
- библиотека GNU C: динамически подключаемые библиотеки
также виртуальный пакет, предоставляемый libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.27) [riscv64]
- dep: libc6 (>= 2.37) [sh4]
- dep: libc6 (>= 2.4) [amd64, m68k, mips64el, ppc64, s390x, sparc64]
-
- dep: r-api-4.0
- виртуальный пакет, предоставляемый r-base-core
-
- dep: r-api-bioc-3.18 [hppa, ia64, m68k, sh4, x32]
- Пакет недоступен
-
- dep: r-api-bioc-3.19 [не hppa, ia64, m68k, sh4, x32]
- виртуальный пакет, предоставляемый r-bioc-biocgenerics
-
- dep: r-bioc-biocgenerics (>= 0.37.0) [hppa, ia64, m68k, sh4, x32]
- generic functions for Bioconductor
- dep: r-bioc-biocgenerics (>= 0.50.0) [не hppa, ia64, m68k, sh4, x32]
-
- dep: r-bioc-genomeinfodb (>= 1.15.2) [hppa, ia64, m68k, sh4, x32]
- BioConductor utilities for manipulating chromosome identifiers
- dep: r-bioc-genomeinfodb (>= 1.40.1) [не hppa, ia64, m68k, sh4, x32]
-
- dep: r-bioc-iranges (>= 2.31.2) [hppa, ia64, m68k, sh4, x32]
- GNU R low-level containers for storing sets of integer ranges
- dep: r-bioc-iranges (>= 2.38.1) [не hppa, ia64, m68k, sh4, x32]
-
- dep: r-bioc-s4vectors (>= 0.27.12) [hppa, ia64, m68k, sh4, x32]
- BioConductor S4 implementation of vectors and lists
- dep: r-bioc-s4vectors (>= 0.42.1) [не hppa, ia64, m68k, sh4, x32]
-
- dep: r-bioc-xvector (>= 0.29.2) [hppa, ia64, m68k, sh4, x32]
- BioConductor representation and manpulation of external sequences
- dep: r-bioc-xvector (>= 0.44.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-annotate [hppa, ia64, m68k, sh4, x32]
- BioConductor annotation for microarrays
- sug: r-bioc-annotate (>= 1.82.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-annotationdbi [hppa, ia64, m68k, sh4, x32]
- GNU R Annotation Database Interface for BioConductor
- sug: r-bioc-annotationdbi (>= 1.66.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-annotationhub [hppa, ia64, m68k, sh4, x32]
- GNU R client to access AnnotationHub resources
- sug: r-bioc-annotationhub (>= 3.12.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-biobase [hppa, ia64, m68k, sh4, x32]
- base functions for Bioconductor
- sug: r-bioc-biobase (>= 2.64.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-biocstyle [hppa, ia64, m68k, sh4, x32]
- standard styles for vignettes and other Bioconductor documents
- sug: r-bioc-biocstyle (>= 2.32.1) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-biostrings (>= 2.25.3) [hppa, ia64, m68k, sh4, x32]
- GNU R string objects representing biological sequences
- sug: r-bioc-biostrings (>= 2.72.1) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-bsgenome [hppa, ia64, m68k, sh4, x32]
- BioConductor infrastructure for Biostrings-based genome data packages
- sug: r-bioc-bsgenome (>= 1.72.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-deseq2 [hppa, ia64, sh4, x32]
- R package for RNA-Seq Differential Expression Analysis
- sug: r-bioc-deseq2 (>= 1.44.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-dexseq [hppa, ia64, m68k, sh4, x32]
- GNU R inference of differential exon usage in RNA-Seq
- sug: r-bioc-dexseq (>= 1.50.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-edger [hppa, ia64, m68k, sh4, x32]
- Empirical analysis of digital gene expression data in R
- sug: r-bioc-edger (>= 4.2.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-genomicalignments [hppa, ia64, m68k, sh4, x32]
- BioConductor representation and manipulation of short genomic alignments
- sug: r-bioc-genomicalignments (>= 1.40.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-genomicfeatures [hppa, ia64, m68k, sh4, x32]
- GNU R tools for making and manipulating transcript centric annotations
- sug: r-bioc-genomicfeatures (>= 1.56.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-gviz [hppa, ia64, m68k, sh4, x32]
- Plotting data and annotation information along genomic coordinates
- sug: r-bioc-gviz (>= 1.48.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-keggrest [hppa, ia64, m68k, sh4, x32]
- GNU R client-side REST access to KEGG
- sug: r-bioc-keggrest (>= 1.44.1) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-bioc-rsamtools (>= 1.13.53) [hppa, ia64, m68k, sh4, x32]
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
- sug: r-bioc-rsamtools (>= 2.20.0) [не hppa, ia64, m68k, sh4, x32]
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- sug: r-bioc-rtracklayer [hppa, ia64, m68k, sh4, x32]
- GNU R interface to genome browsers and their annotation tracks
- sug: r-bioc-rtracklayer (>= 1.64.0) [не hppa, ia64, m68k, sh4, x32]
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- sug: r-bioc-summarizedexperiment (>= 0.1.5) [hppa, ia64, m68k, sh4, x32]
- BioConductor assay container
- sug: r-bioc-summarizedexperiment (>= 1.34.0) [не hppa, ia64, m68k, sh4, x32]
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- sug: r-bioc-variantannotation [hppa, ia64, m68k, sh4, x32]
- BioConductor annotation of genetic variants
- sug: r-bioc-variantannotation (>= 1.50.0) [не hppa, ia64, m68k, sh4, x32]
-
- sug: r-cran-digest
- GNU R package for 'hash digest' of R data structures
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-matrix
- GNU R package of classes for dense and sparse matrices
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- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- sug: r-cran-runit
- GNU R package providing unit testing framework
Загрузка r-bioc-genomicranges
| Архитектура | Версия | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|---|
| alpha (неофициальный перенос) | 1.56.1+dfsg-1 | 1 798,6 Кб | 2 819,0 Кб | [список файлов] |
| amd64 | 1.56.1+dfsg-1 | 1 799,1 Кб | 2 804,0 Кб | [список файлов] |
| arm64 | 1.56.1+dfsg-1 | 1 798,7 Кб | 2 820,0 Кб | [список файлов] |
| hppa (неофициальный перенос) | 1.54.1+dfsg-1 | 1 783,6 Кб | 2 790,0 Кб | [список файлов] |
| ia64 (неофициальный перенос) | 1.54.1+dfsg-1 | 1 783,4 Кб | 2 812,0 Кб | [список файлов] |
| m68k (неофициальный перенос) | 1.54.1+dfsg-1 | 1 781,8 Кб | 2 780,0 Кб | [список файлов] |
| mips64el | 1.56.1+dfsg-1 | 1 797,4 Кб | 2 825,0 Кб | [список файлов] |
| ppc64 (неофициальный перенос) | 1.56.1+dfsg-1 | 1 799,8 Кб | 2 884,0 Кб | [список файлов] |
| ppc64el | 1.56.1+dfsg-1 | 1 799,0 Кб | 2 820,0 Кб | [список файлов] |
| riscv64 | 1.56.1+dfsg-1 | 1 798,9 Кб | 2 796,0 Кб | [список файлов] |
| s390x | 1.56.1+dfsg-1 | 1 798,2 Кб | 2 804,0 Кб | [список файлов] |
| sh4 (неофициальный перенос) | 1.54.1+dfsg-1 | 1 781,9 Кб | 2 804,0 Кб | [список файлов] |
| sparc64 (неофициальный перенос) | 1.56.1+dfsg-1 | 1 796,5 Кб | 3 780,0 Кб | [список файлов] |
| x32 (неофициальный перенос) | 1.54.1+dfsg-1 | 1 784,3 Кб | 2 788,0 Кб | [список файлов] |