Package: samtools (1.20-3)

[ Source: samtools  ]

processing sequence alignments in SAM, BAM and CRAM formats

Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP or HTTP server.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Networking: Client, Network Protocol: FTP, protocol::http, role::program, Scope: Utility, Interface Toolkit: Ncurses TUI, Purpose: use::analysing, use::calculating, Filtering, Works with: Biological Sequence

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amd64	637.6 kB	1,409.0 kB	[list of files]
arm64	609.3 kB	1,673.0 kB	[list of files]
armel	601.7 kB	1,330.0 kB	[list of files]
armhf	605.0 kB	1,146.0 kB	[list of files]
i386	672.3 kB	1,538.0 kB	[list of files]
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s390x	643.8 kB	1,485.0 kB	[list of files]