Package: cd-hit (4.8.1-4 and others)

Links for cd-hit

Debian Resources:

Download Source Package cd-hit:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Tim Booth (QA Page)
Andreas Tille (QA Page)
Étienne Mollier (QA Page)

External Resources:

Homepage [weizhongli-lab.org]

Similar packages:

suite of programs designed to quickly group sequences

cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, implemented-in::perl, User Interface: Command Line, Role: role::program, use::comparing, Works with: Biological Sequence

Other Packages Related to cd-hit

depends

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dep: libc6 (>= 2.14) [amd64]

GNU C 라이브러리: 공유 라이브러리
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.17) [ppc64el]

dep: libc6 (>= 2.34) [riscv64]

dep: libc6 (>= 2.38) [arm64]

dep: libc6 (>= 2.7) [not amd64, arm64, ppc64el, riscv64]
dep: libgcc-s1 (>= 3.0) [not armel, armhf, i386, riscv64]

GCC 기능 지원 라이브러리

dep: libgcc-s1 (>= 3.4) [riscv64]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [i386]
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) 지원 라이브러리
dep: libstdc++6 (>= 13.1) [arm64, riscv64]

GNU 표준 C++ 라이브러리 v3

dep: libstdc++6 (>= 5.2) [not arm64, riscv64]
dep: perl

래리 월의 Practical Extraction and Report Language
dep: zlib1g (>= 1:1.1.4)

압축 라이브러리 - 런타임

Download cd-hit

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
amd64	4.8.1-4	510.3 kB	1,411.0 kB	[list of files]
arm64	4.8.1-4+b1	496.6 kB	1,428.0 kB	[list of files]
armel	4.8.1-4	491.0 kB	1,319.0 kB	[list of files]
armhf	4.8.1-4	487.6 kB	1,111.0 kB	[list of files]
i386	4.8.1-4	511.4 kB	1,477.0 kB	[list of files]
mips64el	4.8.1-4	510.9 kB	1,588.0 kB	[list of files]
ppc64el	4.8.1-4	508.7 kB	1,813.0 kB	[list of files]
riscv64	4.8.1-4+b1	505.5 kB	1,236.0 kB	[list of files]
s390x	4.8.1-4	496.6 kB	1,429.0 kB	[list of files]