Package: cd-hit (4.6.8-2)

[ Source: cd-hit  ]

suite of programs designed to quickly group sequences

cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, implemented-in::perl, User Interface: Command Line, Role: role::program, use::comparing, Works with: Biological Sequence

Other Packages Related to cd-hit

• dep: libc6 (>= 2.14) [amd64]

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.7) [armhf, i386]

• dep: libgcc1 (>= 1:3.0) [amd64, arm64]

  GCC 기능 지원 라이브러리

  dep: libgcc1 (>= 1:3.5) [armhf]

  dep: libgcc1 (>= 1:4.2) [i386]

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) 지원 라이브러리

• dep: libstdc++6 (>= 5.2)

  GNU 표준 C++ 라이브러리 v3

• dep: perl

  래리 월의 Practical Extraction and Report Language

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Architecture	Package Size	Installed Size	Files
amd64	508.9 kB	1,377.0 kB	[list of files]
arm64	492.7 kB	1,280.0 kB	[list of files]
armhf	484.1 kB	1,083.0 kB	[list of files]
i386	508.3 kB	1,424.0 kB	[list of files]