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[ Source: cd-hit  ]

Package: cd-hit (4.8.1-4 and others)

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Programpakke designet til hurtigt at gruppere sekvenser

Cd-hit indeholder et antal programmer designet til hurtigt at gruppere sekvenser. Cd-hit grupperer proteiner i klynger, som når en brugerdefineret lighedstærskel. Cd-hit-est svarer til cd-hit, men er designet til at gruppere nukleotidsekvenser (uden introner). Cd-hit-est-2d ligner cd-hit-2d men er designet til at sammenligne to nukleotide datasæt. Et antal andre relaterede programmer er også inkluderet i pakken. Se venligst manualen for cd-hit, også en del af denne pakke, for yderligere information.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, implemented-in::perl, User Interface: Command Line, Role: role::program, use::comparing, Works with: Biological Sequence

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Download cd-hit

Download for all available architectures
Architecture Version Package Size Installed Size Files
amd64 4.8.1-4 510.3 kB1,411.0 kB [list of files]
arm64 4.8.1-4+b1 496.6 kB1,428.0 kB [list of files]
armel 4.8.1-4 491.0 kB1,319.0 kB [list of files]
armhf 4.8.1-4 487.6 kB1,111.0 kB [list of files]
i386 4.8.1-4 511.4 kB1,477.0 kB [list of files]
mips64el 4.8.1-4 510.9 kB1,588.0 kB [list of files]
ppc64el 4.8.1-4 508.7 kB1,813.0 kB [list of files]
riscv64 4.8.1-4+b1 505.5 kB1,236.0 kB [list of files]
s390x 4.8.1-4 496.6 kB1,429.0 kB [list of files]