Paket: cd-hit (4.8.1-4 och andra)

[ Källkod: cd-hit  ]

suite of programs designed to quickly group sequences

cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information.

Märken: Field: Biologi, Bioinformatics, Implemented in: implemented-in::c++, implemented-in::perl, User Interface: Command Line, Role: role::program, use::comparing, Works with: Biological Sequence

Andra paket besläktade med cd-hit

• dep: libc6 (>= 2.14) [amd64]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.17) [ppc64el]

  dep: libc6 (>= 2.34) [riscv64]

  dep: libc6 (>= 2.38) [arm64]

  dep: libc6 (>= 2.7) [ej amd64, arm64, ppc64el, riscv64]

• dep: libgcc-s1 (>= 3.0) [ej armel, armhf, i386, riscv64]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386]

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 13.1) [arm64, riscv64]

  GNU standardbibliotek v3 för C++

  dep: libstdc++6 (>= 5.2) [ej arm64, riscv64]

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• dep: zlib1g (>= 1:1.1.4)

  Kompressionsbibliotek - körtidspaket

Hämta cd-hit

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
amd64	4.8.1-4	510,3 kbyte	1.411,0 kbyte	[filförteckning]
arm64	4.8.1-4+b1	496,6 kbyte	1.428,0 kbyte	[filförteckning]
armel	4.8.1-4	491,0 kbyte	1.319,0 kbyte	[filförteckning]
armhf	4.8.1-4	487,6 kbyte	1.111,0 kbyte	[filförteckning]
i386	4.8.1-4	511,4 kbyte	1.477,0 kbyte	[filförteckning]
mips64el	4.8.1-4	510,9 kbyte	1.588,0 kbyte	[filförteckning]
ppc64el	4.8.1-4	508,7 kbyte	1.813,0 kbyte	[filförteckning]
riscv64	4.8.1-4+b1	505,5 kbyte	1.236,0 kbyte	[filförteckning]
s390x	4.8.1-4	496,6 kbyte	1.429,0 kbyte	[filförteckning]