Package: topp (2.6.0+cleaned1-4 and others)

[ Source: openms  ]

Sæt af programmer der implementerer OpenMS Proteomic Pipeline

TOPP (the OpenMS proteomic pipeline) er en datakanal for analyse af HPLC/MS-data. Programmet består af et sæt af mange små programmer, som kan kædes sammen for at oprette analysedatakanaler skræddersyet for et specifik problem. Programmerne gør brug af biblioteket libopenms. Nogle eksempler på disse programmer er:

 - TOPPView: En fremviser for massespektrometri-data.
 - TOPPAS: En assistent for grafisk brugerflade-drevne TOPP-
           arbejdsforløbdesign.
 - DTAExtractor: Udtrækker spektra for en MS-kørselsfil til flere
                 filer i DTA-format.
 - FileConverter: Konverterer mellem forskellige MS-filformater.
 - FileFilter: Udtrækker eller manipulerer dele af data fra peak-,
   feature- eller consensus feature-filer.
 - SpectraMerger - Sammenføjer spectra fra et LC/MS-kort, enten
                   efter precursor eller efter RT-blokke.
 - BaselineFilter - Fjerner basislinjen fra profilspectra med brug
                    af et top-hat-filter.
 - InternalCalibration: Anvender en intern kalibrering.
 - PTModel: Træner en model for forudsigelse af proteotypic
            peptider fra et træningssæt.
 - RTPredict: Forudser retentiontider for peptider med en model
              trænet af RTModel.
 - ExecutePipeline: Kør arbejdsforløb oprettet med TOPPAS.

Tags: Interface Toolkit: Qt

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  dep: libc6 (>= 2.38) [not alpha, ia64, m68k, x32]

• dep: libc6.1 (>= 2.34) [alpha]

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  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [not alpha, hppa, ia64, m68k, riscv64, sparc64]

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  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sparc64]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

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• dep: libgcc-s4 (>= 4.1.1) [hppa]

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• dep: libgomp1 (>= 6)

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• dep: libopenms2.6.0 (= 2.6.0+cleaned1-3+b3) [m68k]

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  dep: libopenms2.6.0 (= 2.6.0+cleaned1-3+b5) [alpha]

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  dep: libopenms2.6.0 (= 2.6.0+cleaned1-4+b3) [hppa]

  dep: libopenms2.6.0 (= 2.6.0+cleaned1-4+b4) [not alpha, hppa, ia64, m68k, x32]

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  dep: libqt5core5a (>= 5.15.1) [x32]

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Download topp

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.6.0+cleaned1-3+b5	2,978.8 kB	22,869.0 kB	[list of files]
amd64	2.6.0+cleaned1-4+b4	3,139.0 kB	17,386.0 kB	[list of files]
arm64	2.6.0+cleaned1-4+b4	2,769.8 kB	20,673.0 kB	[list of files]
hppa (unofficial port)	2.6.0+cleaned1-4+b3	3,020.5 kB	16,615.0 kB	[list of files]
i386	2.6.0+cleaned1-4+b4	3,298.9 kB	16,751.0 kB	[list of files]
ia64 (unofficial port)	2.6.0+cleaned1-4	3,752.2 kB	29,894.0 kB	[list of files]
m68k (unofficial port)	2.6.0+cleaned1-3+b3	3,171.2 kB	17,072.0 kB	[list of files]
mips64el	2.6.0+cleaned1-4+b4	2,823.9 kB	23,041.0 kB	[list of files]
ppc64 (unofficial port)	2.6.0+cleaned1-4+b4	3,076.1 kB	24,774.0 kB	[list of files]
ppc64el	2.6.0+cleaned1-4+b4	3,084.3 kB	23,619.0 kB	[list of files]
riscv64	2.6.0+cleaned1-4+b4	2,965.2 kB	13,352.0 kB	[list of files]
s390x	2.6.0+cleaned1-4+b4	3,150.9 kB	17,833.0 kB	[list of files]
sparc64 (unofficial port)	2.6.0+cleaned1-4+b4	3,265.2 kB	184,756.0 kB	[list of files]
x32 (unofficial port)	2.6.0+cleaned1-4	3,027.2 kB	15,324.0 kB	[list of files]