Paket: topp (2.6.0+cleaned1-4 och andra)

[ Källkod: openms  ]

set of programs implementing The OpenMS Proteomic Pipeline

TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :

  - TOPPView: A viewer for mass spectrometry data.
  - TOPPAS: An assistant for GUI-driven TOPP workflow design.
  - DTAExtractor: Extracts spectra of an MS run file to several
    files in DTA format.
  - FileConverter:  Converts between different MS file formats.
  - FileFilter: Extracts or manipulates portions of data from peak,
    feature or consensus feature files.
  - SpectraMerger: Merges spectra from an LC/MS map, either by
    precursor or by RT blocks.
  - BaselineFilter: Removes the baseline from profile spectra using a
    top-hat filter.
  - InternalCalibration: Applies an internal calibration.
  - PTModel: Trains a model for the prediction of proteotypic
    peptides from a training set.
  - RTPredict: Predicts retention times for peptides using a model
    trained by RTModel.
  - ExecutePipeline: Executes workflows created by TOPPAS.

Märken: Interface Toolkit: Qt

Andra paket besläktade med topp

• dep: libboost-regex1.74.0-icu72 [alpha, m68k, x32]

  virtuellt paket som tillhandahålls av libboost-regex1.74.0

• dep: libc6 (>= 2.34) [m68k, x32]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.38) [ej alpha, ia64, m68k, x32]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [ej alpha, hppa, ia64, m68k, riscv64, sparc64]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sparc64]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC stödbibliotek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC stödbibliotek

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libopenms2.6.0 (= 2.6.0+cleaned1-3+b3) [m68k]

  library for LC/MS data management and analysis - runtime

  dep: libopenms2.6.0 (= 2.6.0+cleaned1-3+b5) [alpha]

  dep: libopenms2.6.0 (= 2.6.0+cleaned1-4) [ia64, x32]

  dep: libopenms2.6.0 (= 2.6.0+cleaned1-4+b3) [hppa]

  dep: libopenms2.6.0 (= 2.6.0+cleaned1-4+b4) [ej alpha, hppa, ia64, m68k, x32]

• dep: libqt5core5a (>= 5.11.3) [alpha, ia64, m68k]

  Qt 5 core module

  dep: libqt5core5a (>= 5.15.1) [x32]

• dep: libqt5core5t64 (>= 5.11.3) [ej alpha, amd64, i386, ia64, m68k, x32]

  Qt 5 core module

  dep: libqt5core5t64 (>= 5.15.1) [amd64, i386]

• dep: libqt5gui5 (>= 5.11.3) [alpha, ia64, m68k, x32]

  Qt 5 GUI module

  eller libqt5gui5-gles (>= 5.11.3)

  Qt 5 GUI module — OpenGL ES variant

• dep: libqt5gui5t64 (>= 5.11.3) [ej alpha, ia64, m68k, x32]

  Qt 5 GUI module

  eller libqt5gui5-gles (>= 5.11.3)

  Qt 5 GUI module — OpenGL ES variant

• dep: libqt5widgets5 (>= 5.11.3) [alpha, ia64, m68k, x32]

  Qt 5 widgets module

• dep: libqt5widgets5t64 (>= 5.11.3) [ej alpha, ia64, m68k, x32]

  Qt 5 widgets module

• dep: libstdc++6 (>= 11) [m68k]

  GNU standardbibliotek v3 för C++

  dep: libstdc++6 (>= 13.1) [alpha, ia64, x32]

  dep: libstdc++6 (>= 14) [ej alpha, ia64, m68k, x32]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: libxerces-c3.2 [alpha, ia64, m68k, x32]

  validating XML parser library for C++

• dep: libxerces-c3.2t64 [ej alpha, ia64, m68k, x32]

  validating XML parser library for C++

• dep: openms-common (= 2.6.0+cleaned1-3) [alpha, m68k]

  package for LC/MS data management and analysis - shared data

  dep: openms-common (= 2.6.0+cleaned1-4) [ej alpha, m68k]

• sug: openms-doc

  package for LC/MS data management and analysis - documentation

Hämta topp

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
alpha (inofficiell anpassning)	2.6.0+cleaned1-3+b5	2.978,8 kbyte	22.869,0 kbyte	[filförteckning]
amd64	2.6.0+cleaned1-4+b4	3.139,0 kbyte	17.386,0 kbyte	[filförteckning]
arm64	2.6.0+cleaned1-4+b4	2.769,8 kbyte	20.673,0 kbyte	[filförteckning]
hppa (inofficiell anpassning)	2.6.0+cleaned1-4+b3	3.020,5 kbyte	16.615,0 kbyte	[filförteckning]
i386	2.6.0+cleaned1-4+b4	3.298,9 kbyte	16.751,0 kbyte	[filförteckning]
ia64 (inofficiell anpassning)	2.6.0+cleaned1-4	3.752,2 kbyte	29.894,0 kbyte	[filförteckning]
m68k (inofficiell anpassning)	2.6.0+cleaned1-3+b3	3.171,2 kbyte	17.072,0 kbyte	[filförteckning]
mips64el	2.6.0+cleaned1-4+b4	2.823,9 kbyte	23.041,0 kbyte	[filförteckning]
ppc64 (inofficiell anpassning)	2.6.0+cleaned1-4+b4	3.076,1 kbyte	24.774,0 kbyte	[filförteckning]
ppc64el	2.6.0+cleaned1-4+b4	3.084,3 kbyte	23.619,0 kbyte	[filförteckning]
riscv64	2.6.0+cleaned1-4+b4	2.965,2 kbyte	13.352,0 kbyte	[filförteckning]
s390x	2.6.0+cleaned1-4+b4	3.150,9 kbyte	17.833,0 kbyte	[filförteckning]
sparc64 (inofficiell anpassning)	2.6.0+cleaned1-4+b4	3.265,2 kbyte	184.756,0 kbyte	[filförteckning]
x32 (inofficiell anpassning)	2.6.0+cleaned1-4	3.027,2 kbyte	15.324,0 kbyte	[filförteckning]