套件：tiddit（3.6.1+dfsg-2）

[ 原始碼： tiddit  ]

structural variant calling

TIDDIT is a tool to used to identify chromosomal rearrangements using Mate Pair or Paired End sequencing data. TIDDIT identifies intra and inter- chromosomal translocations, deletions, tandem-duplications and inversions, using supplementary alignments as well as discordant pairs.

TIDDIT has two analysis modules. The sv mode, which is used to search for structural variants. And the cov mode that analyse the read depth of a bam file and generates a coverage report.

其他與 tiddit 有關的套件

• dep: libc6 (>= 2.17) [arm64, ppc64el]

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.4) [除 arm64, ppc64el, riscv64]

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.14)

  dep: python3 (>= 3.12~)

• dep: python3-joblib

  tools to provide lightweight pipelining in Python

• dep: python3-numpy

  Fast array facility to the Python language (Python 3)

• dep: python3-numpy2-abi0

  套件暫時不可用

  或者 python3-numpy-abi9

  本虛擬套件由這些套件填實： python3-numpy

• dep: python3-pysam

  interface for the SAM/BAM sequence alignment and mapping format (Python 3)

下載 tiddit

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
amd64	483。4 kB	2，559。0 kB	[檔案列表]
arm64	345。9 kB	2，407。0 kB	[檔案列表]
armel	375。0 kB	2，519。0 kB	[檔案列表]
armhf	392。1 kB	1，751。0 kB	[檔案列表]
i386	417。1 kB	2，543。0 kB	[檔案列表]
mips64el	326。5 kB	2，710。0 kB	[檔案列表]
ppc64el	366。7 kB	2，983。0 kB	[檔案列表]
riscv64	403。9 kB	1，743。0 kB	[檔案列表]