套件：r-cran-spp（1.16.0-2 以及其他的）

[ 原始碼： r-cran-spp  ]

GNU R ChIP-seq processing pipeline

R package for anlaysis of ChIP-seq and other functional sequencing data

 * Assess overall DNA-binding signals in the data and select appropriate
   quality of tag alignment.
 * Discard or restrict positions with abnormally high number of tags.
 * Calculate genome-wide profiles of smoothed tag density and save them
   in WIG files for viewing in other browsers.
 * Calculate genome-wide profiles providing conservative statistical
   estimates of fold enrichment ratios along the genome. These can be
   exported for browser viewing, or thresholded to determine regions of
   significant enrichment/depletion.
 * Determine statistically significant point binding positions
 * Assess whether the set of point binding positions detected at a
   current sequencing depth meets saturation criteria, and if does not,
   estimate what sequencing depth would be required to do so.

其他與 r-cran-spp 有關的套件

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.27) [riscv64]

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

  dep: libc6 (>= 2.29) [除 alpha, arm64, ia64, riscv64, sh4, sparc64]

  dep: libc6 (>= 2.31) [sh4]

  dep: libc6 (>= 2.38) [arm64]

  dep: libc6 (>= 2.4) [sparc64]

• dep: libc6.1 (>= 2.29) [alpha]

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6.1-udeb

  dep: libc6.1 (>= 2.31) [ia64]

• dep: libgcc-s1 (>= 3.0) [除 alpha, hppa, ia64, riscv64, sh4, sparc64]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC 支援函式庫

• dep: libgcc1 (>= 1:3.4) [sparc64]

  套件暫時不可用

• dep: libstdc++6 (>= 13.1) [arm64, riscv64]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 5.2) [除 arm64, riscv64]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: r-api-3.5 [sparc64]

  套件暫時不可用

• dep: r-api-4.0 [除 sparc64]

  本虛擬套件由這些套件填實： r-base-core

• dep: r-base-core (>= 3.5.1-1) [sparc64]

  GNU R core of statistical computation and graphics system

  dep: r-base-core (>= 4.0.2-1) [除 arm64, riscv64, sh4, sparc64]

  dep: r-base-core (>= 4.1.1-2) [sh4]

• dep: r-bioc-rsamtools

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-cran-bh (>= 1.66) [除 sparc64]

  (Virtual) GNU R package to provide BH

• dep: r-cran-catools

  GNU R package providing various utility functions

• dep: r-cran-rcpp

  GNU R package for Seamless R and C++ Integration

• dep: zlib1g (>= 1:1.1.4)

  壓縮函式庫 - 跑程式時用(runtime)

下載 r-cran-spp

下載可用於所有硬體架構的

硬體架構	版本	套件大小	安裝後大小	檔案
alpha （非官方移植版）	1.16.0-2	316。0 kB	473。0 kB	[檔案列表]
amd64	1.16.0-2	315。3 kB	453。0 kB	[檔案列表]
arm64	1.16.0-2+b1	315。1 kB	436。0 kB	[檔案列表]
hppa （非官方移植版）	1.16.0-2	320。3 kB	461。0 kB	[檔案列表]
ia64 （非官方移植版）	1.16.0-2	332。4 kB	597。0 kB	[檔案列表]
mips64el	1.16.0-2	308。7 kB	452。0 kB	[檔案列表]
ppc64 （非官方移植版）	1.16.0-2	316。9 kB	499。0 kB	[檔案列表]
ppc64el	1.16.0-2	317。2 kB	497。0 kB	[檔案列表]
riscv64	1.16.0-2+b1	312。3 kB	401。0 kB	[檔案列表]
s390x	1.16.0-2	311。0 kB	444。0 kB	[檔案列表]
sh4 （非官方移植版）	1.16.0-2	332。8 kB	439。0 kB	[檔案列表]
sparc64 （非官方移植版）	1.15.5-1	307。6 kB	431。0 kB	[檔案列表]
x32 （非官方移植版）	1.16.0-2	316。0 kB	441。0 kB	[檔案列表]