套件：r-cran-spp（1.16.0-2）

[ 原始碼： r-cran-spp  ]

GNU R ChIP-seq processing pipeline

R package for anlaysis of ChIP-seq and other functional sequencing data

 * Assess overall DNA-binding signals in the data and select appropriate
   quality of tag alignment.
 * Discard or restrict positions with abnormally high number of tags.
 * Calculate genome-wide profiles of smoothed tag density and save them
   in WIG files for viewing in other browsers.
 * Calculate genome-wide profiles providing conservative statistical
   estimates of fold enrichment ratios along the genome. These can be
   exported for browser viewing, or thresholded to determine regions of
   significant enrichment/depletion.
 * Determine statistically significant point binding positions
 * Assess whether the set of point binding positions detected at a
   current sequencing depth meets saturation criteria, and if does not,
   estimate what sequencing depth would be required to do so.

其他與 r-cran-spp 有關的套件

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.29)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libgcc-s1 (>= 3.0) [除 armel, armhf]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: r-api-4.0

  本虛擬套件由這些套件填實： r-base-core

• dep: r-base-core (>= 4.0.2-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-rsamtools

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-cran-bh (>= 1.66)

  (Virtual) GNU R package to provide BH

• dep: r-cran-catools

  GNU R package providing various utility functions

• dep: r-cran-rcpp

  GNU R package for Seamless R and C++ Integration

• dep: zlib1g (>= 1:1.1.4)

  壓縮函式庫 - 跑程式時用(runtime)

下載 r-cran-spp

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
amd64	315。3 kB	453。0 kB	[檔案列表]
arm64	309。7 kB	425。0 kB	[檔案列表]
armel	309。8 kB	424。0 kB	[檔案列表]
armhf	309。5 kB	391。0 kB	[檔案列表]
i386	320。8 kB	459。0 kB	[檔案列表]
mips64el	308。7 kB	452。0 kB	[檔案列表]
mipsel	308。6 kB	454。0 kB	[檔案列表]
ppc64el	317。2 kB	497。0 kB	[檔案列表]
s390x	311。0 kB	444。0 kB	[檔案列表]